RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 FEZ1Q99689 392 aa9.99□□□□□ -0.81
ATG4D-210ENST00000588972 OSGEPQ9NPF4 335 aa9.99□□□□□ -0.81
ATG4D-210ENST00000588972 ASAP1Q9ULH1 1129 aa9.99□□□□□ -0.81
ATG4D-210ENST00000588972 PTCH2Q9Y6C5 1203 aa9.99□□□□□ -0.81
ATG4D-210ENST00000588972 A0A0G2JLW4 131 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 SLC22A31A6NKX4 558 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 NME1P15531 152 aaKnown RBP9.98□□□□□ -0.81
ATG4D-210ENST00000588972 ALAS2P22557 587 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 FSTL1Q12841 308 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 EIF4A2Q14240 407 aaKnown RBP9.98□□□□□ -0.81
ATG4D-210ENST00000588972 FAM117BQ6P1L5 589 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 UNC5AQ6ZN44 842 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 ARHGAP27Q6ZUM4 889 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 CYFIP1Q7L576 1253 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 JPH1Q9HDC5 661 aaPredicted RBP9.98□□□□□ -0.81
ATG4D-210ENST00000588972 MBIPQ9NS73 344 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 NSFL1CQ9UNZ2 370 aaKnown RBP9.98□□□□□ -0.81
ATG4D-210ENST00000588972 SLC12A7Q9Y666 1083 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 TACC3Q9Y6A5 838 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 LTBP3Q9NS15 1303 aa9.98□□□□□ -0.81
ATG4D-210ENST00000588972 KCPQ6ZWJ8 1503 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 FSCN2O14926 492 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 PHKG2P15735 406 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 DPEP1P16444 411 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 PLCG1P19174 1290 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 MTHFSP49914 203 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 TRAPPC3LQ5T215 181 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 INTS3Q68E01 1043 aaKnown RBP9.97□□□□□ -0.81
ATG4D-210ENST00000588972 NLRC3Q7RTR2 1065 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 IFNL2Q8IZJ0 200 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 ELMO3Q96BJ8 720 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 WDR89Q96FK6 387 aaPredicted RBP9.97□□□□□ -0.81
ATG4D-210ENST00000588972 CNNM2Q9H8M5 875 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 ATG3Q9NT62 314 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 CNTNAP4Q9C0A0 1308 aa9.97□□□□□ -0.81
ATG4D-210ENST00000588972 COL3A1P02461 1466 aaPredicted RBP9.97□□□□□ -0.81
ATG4D-210ENST00000588972 GYS1P13807 737 aa9.96□□□□□ -0.82
ATG4D-210ENST00000588972 LIG1P18858 919 aa9.96□□□□□ -0.82
ATG4D-210ENST00000588972 AFF1P51825 1210 aaKnown RBP9.96□□□□□ -0.82
ATG4D-210ENST00000588972 PDE3AQ14432 1141 aa9.96□□□□□ -0.82
ATG4D-210ENST00000588972 TMEM201Q5SNT2 666 aa9.96□□□□□ -0.82
ATG4D-210ENST00000588972 VHLLQ6RSH7 139 aa9.96□□□□□ -0.82
ATG4D-210ENST00000588972 EEPD1Q7L9B9 569 aa9.96□□□□□ -0.82
ATG4D-210ENST00000588972 RPUSD2Q8IZ73 545 aaKnown RBP9.96□□□□□ -0.82
ATG4D-210ENST00000588972 SLC9A7Q96T83 725 aa9.96□□□□□ -0.82
ATG4D-210ENST00000588972 DCDC2CA8MYV0 355 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 TNFRSF10CO14798 259 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 ALBP02768 609 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 RFC4P35249 363 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 MASP1P48740 699 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 HTRA3P83110 453 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 AMPD3Q01432 767 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 PDE4BQ07343 736 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 NCAPHQ15003 741 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 KIF4BQ2VIQ3 1234 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 CDCP2Q5VXM1 449 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 SLCO4C1Q6ZQN7 724 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 KLHDC7BQ96G42 594 aa9.95□□□□□ -0.82
ATG4D-210ENST00000588972 PHAXQ9H814 394 aaKnown RBP9.95□□□□□ -0.82
ATG4D-210ENST00000588972 MYH14Q7Z406 1995 aaKnown RBP9.94□□□□□ -0.82
ATG4D-210ENST00000588972 TM4SF5O14894 197 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 MARCH6O60337 910 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 ASMTLO95671 621 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 PPP2R1AP30153 589 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 TCEA2Q15560 299 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 TAF7LQ5H9L4 462 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 GPR161Q8N6U8 529 aaKnown RBP9.94□□□□□ -0.82
ATG4D-210ENST00000588972 DCAF5Q96JK2 942 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 CWC22Q9HCG8 908 aaKnown RBP9.94□□□□□ -0.82
ATG4D-210ENST00000588972 RNF181Q9P0P0 153 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 PIM2Q9P1W9 311 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 PCDHB10Q9UN67 800 aa9.94□□□□□ -0.82
ATG4D-210ENST00000588972 ERVV-2B6SEH9 535 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 RPS6KA4O75676 772 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 HSP90AB1P08238 724 aaKnown RBP9.93□□□□□ -0.82
ATG4D-210ENST00000588972 KCNA3P22001 575 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 IL13P35225 146 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 HNRNPUQ00839 825 aaKnown RBP eCLIP9.93□□□□□ -0.82
ATG4D-210ENST00000588972 DALRD3Q5D0E6 543 aaKnown RBP9.93□□□□□ -0.82
ATG4D-210ENST00000588972 C12orf40Q86WS4 652 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 SYNPOQ8N3V7 929 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 GOLGA6L1Q8N7Z2 621 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 KLHL6Q8WZ60 621 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 METTL14Q9HCE5 456 aaKnown RBP9.93□□□□□ -0.82
ATG4D-210ENST00000588972 KLHL3Q9UH77 587 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 ADAM30Q9UKF2 790 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 SBF1O95248 1867 aa9.93□□□□□ -0.82
ATG4D-210ENST00000588972 KDM6AO15550 1401 aaPredicted RBP9.92□□□□□ -0.82
ATG4D-210ENST00000588972 PRAMEF27A3QJZ7 478 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 PGRP06401 933 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 FAM153BP0C7A2 387 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 EPXP11678 715 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 GRK4P32298 578 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 ZC3H12AQ5D1E8 599 aaKnown RBP9.92□□□□□ -0.82
ATG4D-210ENST00000588972 WFDC8Q8IUA0 241 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 SMC1BQ8NDV3 1235 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 ZSWIM2Q8NEG5 633 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 SPATA9Q9BWV2 254 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 KLHL42Q9P2K6 505 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms