RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 CHAMP1Q96JM3 812 aa26■■□□□ 1.75
ACTN4-210ENST00000588618 PTPN18Q99952 460 aa26■■□□□ 1.75
ACTN4-210ENST00000588618 SMCO2A6NFE2 343 aa25.99■■□□□ 1.75
ACTN4-210ENST00000588618 CYP2C8P10632 490 aa25.99■■□□□ 1.75
ACTN4-210ENST00000588618 GALNT17Q6IS24 598 aa25.99■■□□□ 1.75
ACTN4-210ENST00000588618 AGBL1Q96MI9 1066 aa25.99■■□□□ 1.75
ACTN4-210ENST00000588618 PAGR1Q9BTK6 254 aa25.99■■□□□ 1.75
ACTN4-210ENST00000588618 TEX13BQ9BXU2 312 aa25.99■■□□□ 1.75
ACTN4-210ENST00000588618 ZCCHC17Q9NP64 241 aaKnown RBP25.99■■□□□ 1.75
ACTN4-210ENST00000588618 MRPL11Q9Y3B7 192 aaKnown RBP25.99■■□□□ 1.75
ACTN4-210ENST00000588618 ABCB11O95342 1321 aa25.98■■□□□ 1.75
ACTN4-210ENST00000588618 PEX10O60683 326 aa25.98■■□□□ 1.75
ACTN4-210ENST00000588618 TMEM132BQ14DG7 1078 aa25.98■■□□□ 1.75
ACTN4-210ENST00000588618 SNRNP48Q6IEG0 339 aaKnown RBP25.98■■□□□ 1.75
ACTN4-210ENST00000588618 DIS3L2Q8IYB7 885 aaKnown RBP25.98■■□□□ 1.75
ACTN4-210ENST00000588618 BICD2Q8TD16 824 aa25.98■■□□□ 1.75
ACTN4-210ENST00000588618 BTBD18B2RXH4 712 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 ALAS1P13196 640 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 KRT2P35908 639 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 ADCY7P51828 1080 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 NR5A1Q13285 461 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 IFNL1Q8IU54 200 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 TNPO1Q92973 898 aaKnown RBP25.97■■□□□ 1.75
ACTN4-210ENST00000588618 CUL5Q93034 780 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 ZMYND12Q9H0C1 365 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 GLT8D2Q9H1C3 349 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 ESYT2A0FGR8 921 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 OPLAHO14841 1288 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 ATP2A1O14983 1001 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 FAM173BQ6P4H8 233 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 ZIC5Q96T25 663 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 PSTPIP2Q9H939 334 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 ZNF214Q9UL59 606 aaPredicted RBP25.97■■□□□ 1.75
ACTN4-210ENST00000588618 PCDHA4Q9UN74 947 aa25.97■■□□□ 1.75
ACTN4-210ENST00000588618 IGF2BP3O00425 579 aaKnown RBP eCLIP25.96■■□□□ 1.75
ACTN4-210ENST00000588618 STAT3P40763 770 aa25.96■■□□□ 1.75
ACTN4-210ENST00000588618 MRPL12P52815 198 aaKnown RBP25.96■■□□□ 1.75
ACTN4-210ENST00000588618 NOM1Q5C9Z4 860 aaKnown RBP25.96■■□□□ 1.75
ACTN4-210ENST00000588618 REM2Q8IYK8 340 aaPredicted RBP25.96■■□□□ 1.75
ACTN4-210ENST00000588618 HOMER2Q9NSB8 354 aa25.96■■□□□ 1.75
ACTN4-210ENST00000588618 RABGAP1Q9Y3P9 1069 aa25.96■■□□□ 1.75
ACTN4-210ENST00000588618 M0R2N6 131 aa25.95■■□□□ 1.74
ACTN4-210ENST00000588618 GCLCP48506 637 aaPredicted RBP25.95■■□□□ 1.74
ACTN4-210ENST00000588618 TAF1CQ15572 869 aaPredicted RBP25.95■■□□□ 1.74
ACTN4-210ENST00000588618 BLIDQ8IZY5 108 aa25.95■■□□□ 1.74
ACTN4-210ENST00000588618 TNFRSF25Q93038 417 aa25.95■■□□□ 1.74
ACTN4-210ENST00000588618 U2AF2P26368 475 aaKnown RBP eCLIP25.94■■□□□ 1.74
ACTN4-210ENST00000588618 FOXD4L6Q3SYB3 417 aaPredicted RBP25.94■■□□□ 1.74
ACTN4-210ENST00000588618 EARS2Q5JPH6 523 aaKnown RBP25.94■■□□□ 1.74
ACTN4-210ENST00000588618 FOXD4L3Q6VB84 417 aaPredicted RBP25.94■■□□□ 1.74
ACTN4-210ENST00000588618 RASGRP4Q8TDF6 673 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 ZSCAN16Q9H4T2 348 aaPredicted RBP25.94■■□□□ 1.74
ACTN4-210ENST00000588618 AOC2O75106 756 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 TM4SF4P48230 202 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 DAGLBQ8NCG7 672 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 TRERF1Q96PN7 1200 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 SPATC1LQ9H0A9 340 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 FOXP1Q9H334 677 aaPredicted RBP25.94■■□□□ 1.74
ACTN4-210ENST00000588618 RIC8AQ9NPQ8 531 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 BTBD7Q9P203 1132 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 RIPK3Q9Y572 518 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 ATP6V1DQ9Y5K8 247 aa25.94■■□□□ 1.74
ACTN4-210ENST00000588618 RBBP6Q7Z6E9 1792 aaKnown RBP25.94■■□□□ 1.74
ACTN4-210ENST00000588618 TKFCQ3LXA3 575 aa25.93■■□□□ 1.74
ACTN4-210ENST00000588618 MCF2L2Q86YR7 1114 aa25.93■■□□□ 1.74
ACTN4-210ENST00000588618 REXO1Q8N1G1 1221 aaKnown RBP25.93■■□□□ 1.74
ACTN4-210ENST00000588618 FAM205CA6NFA0 338 aa25.92■■□□□ 1.74
ACTN4-210ENST00000588618 CNMDO75829 334 aa25.92■■□□□ 1.74
ACTN4-210ENST00000588618 HTRA3P83110 453 aa25.92■■□□□ 1.74
ACTN4-210ENST00000588618 RNF146Q9NTX7 359 aa25.92■■□□□ 1.74
ACTN4-210ENST00000588618 ALDH1A1P00352 501 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 COPB2P35606 906 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 ANKRD13CQ8N6S4 541 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 ZFYVE28Q9HCC9 887 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 TXNRD2Q9NNW7 524 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 RBPJLQ9UBG7 517 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 CFBP00751 764 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 CCNA1P78396 465 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 UBE2SQ16763 222 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 BRAPQ7Z569 592 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 RIOX2Q8IUF8 465 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 CCAR1Q8IX12 1150 aaKnown RBP25.91■■□□□ 1.74
ACTN4-210ENST00000588618 GPRC5AQ8NFJ5 357 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 CLEC4DQ8WXI8 215 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 TBC1D5Q92609 795 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 PCDHA6Q9UN73 950 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 PCDHA8Q9Y5H6 950 aa25.91■■□□□ 1.74
ACTN4-210ENST00000588618 SLC25A27O95847 323 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 ERVK-9P63128 1117 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 ERVK-24P63145 666 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 MUM1L1Q5H9M0 696 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 NCAPG2Q86XI2 1143 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 NOSTRINQ8IVI9 506 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 TEX2Q8IWB9 1127 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 ACAD9Q9H845 621 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 TMEM260Q9NX78 707 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 FBXO40Q9UH90 709 aa25.9■■□□□ 1.74
ACTN4-210ENST00000588618 CCDC194A0A1B0GVG4 234 aa25.89■■□□□ 1.74
ACTN4-210ENST00000588618 GCOM1H8Y6P7 765 aaPredicted RBP25.89■■□□□ 1.74
ACTN4-210ENST00000588618 MEIS2O14770 477 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms