RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 AGBL1Q96MI9 1066 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 LSG1Q9H089 658 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 ADD3Q9UEY8 706 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 RIPK3Q9Y572 518 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 COL6A3P12111 3177 aa13.68□□□□□ -0.22
PRKCSH-207ENST00000588269 DNAJC25-GNG10A0A024R161 153 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 DNM1LO00429 736 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 REC8O95072 547 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 KIF5BP33176 963 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 TTBK2Q6IQ55 1244 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 MAMDC4Q6UXC1 1216 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 NSMFQ6X4W1 530 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 TMTC2Q8N394 836 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 TMEM87BQ96K49 555 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 FAM161BQ96MY7 647 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 SENP6Q9GZR1 1112 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 ABHD16BQ9H3Z7 469 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 SPC25Q9HBM1 224 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 A1CFQ9NQ94 594 aaKnown RBP13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 PLXNA1Q9UIW2 1896 aa13.67□□□□□ -0.22
PRKCSH-207ENST00000588269 ABCB11O95342 1321 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 DDAH1O94760 285 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 IGHA2P01877 340 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 GOLGA8HP0CJ92 632 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 CDC37Q16543 378 aaPredicted RBP13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 LRIT3Q3SXY7 679 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 CREB3L3Q68CJ9 461 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 RNF180Q86T96 592 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 CTCFLQ8NI51 663 aaPredicted RBP13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 MTMR10Q9NXD2 777 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 FAM184BQ9ULE4 1060 aa13.66□□□□□ -0.22
PRKCSH-207ENST00000588269 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 CCDC69A6NI79 296 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 SLC27A2O14975 620 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 EIF5BO60841 1220 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 HMGB1P09429 215 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 CALM1P0DP23 149 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 CALM2P0DP24 149 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 CALM3P0DP25 149 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 SEC23AQ15436 765 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 CYB5R4Q7L1T6 521 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 ARMCX2Q7L311 632 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 MCF2L2Q86YR7 1114 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 MB21D2Q8IYB1 491 aaPredicted RBP13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 XPNPEP3Q9NQH7 507 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 CYP39A1Q9NYL5 469 aa13.65□□□□□ -0.22
PRKCSH-207ENST00000588269 KLRF2D3W0D1 207 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 PRC1O43663 620 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 SNAP25P60880 206 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 USH1GQ495M9 461 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 PRAMEF19Q5SWL8 479 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 SYNE3Q6ZMZ3 975 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 RNF207Q6ZRF8 634 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 FBXO11Q86XK2 927 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 ADGRF4Q8IZF3 695 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 FAM133AQ8N9E0 248 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 MAP3K14Q99558 947 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 MRPL11Q9Y3B7 192 aaKnown RBP13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 LTBP2Q14767 1821 aa13.64□□□□□ -0.23
PRKCSH-207ENST00000588269 GNAQP50148 359 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 GRM4Q14833 912 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 MUM1L1Q5H9M0 696 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 STOX1Q6ZVD7 989 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 CCDC144CPQ8IYA2 1237 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 AMNQ9BXJ7 453 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 UBA5Q9GZZ9 404 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 VTA1Q9NP79 307 aa13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 SEC63Q9UGP8 760 aaKnown RBP13.63□□□□□ -0.23
PRKCSH-207ENST00000588269 ZNFX1Q9P2E3 1918 aaKnown RBP13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 NFIBO00712 420 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 ZBTB5O15062 677 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 EPB41L2O43491 1005 aaKnown RBP13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 CALML3P27482 149 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 RTP1P59025 263 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 FGD1P98174 961 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 QRICH1Q2TAL8 776 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 SKAP1Q86WV1 359 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 RGS22Q8NE09 1264 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 DNERQ8NFT8 737 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 NUP133Q8WUM0 1156 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 GUCD1Q96NT3 240 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 ATP11BQ9Y2G3 1177 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 STXBP5LQ9Y2K9 1186 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 SLC12A7Q9Y666 1083 aa13.62□□□□□ -0.23
PRKCSH-207ENST00000588269 PALM3A6NDB9 673 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 SH2B2O14492 632 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 DUSP11O75319 330 aaKnown RBP13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 ZNF865P0CJ78 1059 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 LIFRP42702 1097 aa13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 CNTN2Q02246 1040 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms