RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 DOCK3Q8IZD9 2030 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 PTPDC1A2A3K4 754 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 CPLX1O14810 134 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 PLEKHA8P1O95397 391 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 HOXC6P09630 235 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 ELNP15502 786 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 RBM25P49756 843 aaKnown RBP13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 NEK4P51957 841 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 AKAP17AQ02040 695 aaKnown RBP13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 MFSD14CQ5VZR4 134 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 MCF2L2Q86YR7 1114 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 SH3TC2Q8TF17 1288 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 ABHD8Q96I13 439 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 PIGSQ96S52 555 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 MPHOSPH6Q99547 160 aaKnown RBP13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 RBM27Q9P2N5 1060 aaKnown RBP13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 GJD2Q9UKL4 321 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 PLXNA1Q9UIW2 1896 aa13.75□□□□□ -0.21
SDHDP1-201ENST00000588055 POTEB2H3BUK9 544 aa13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 INHAP05111 366 aa13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 TOB2Q14106 344 aaPredicted RBP13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 CCDC82Q8N4S0 544 aa13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 USP6NLQ92738 828 aa13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 ARMC5Q96C12 935 aa13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 MTMR8Q96EF0 704 aa13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 A1CFQ9NQ94 594 aaKnown RBP13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 DIS3Q9Y2L1 958 aaKnown RBP13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 CENPFP49454 3210 aa13.74□□□□□ -0.21
SDHDP1-201ENST00000588055 CNTNAP5Q8WYK1 1306 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 NFIBO00712 420 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 CYTH3O43739 400 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 ST18O60284 1047 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 CDKL5O76039 1030 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 PGK2P07205 417 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 AK2P54819 239 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 EVCP57679 992 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 RABEP1Q15276 862 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 MUM1L1Q5H9M0 696 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 OLFML2BQ68BL8 750 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 RNF207Q6ZRF8 634 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 TRIM22Q8IYM9 498 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 CMTR1Q8N1G2 835 aaKnown RBP13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 SRBD1Q8N5C6 995 aaKnown RBP13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 IL27Q8NEV9 243 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 TRIB2Q92519 343 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 ZNF274Q96GC6 653 aaPredicted RBP13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 TMEM106CQ9BVX2 250 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 MAF1Q9H063 256 aa13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 ALDH8A1Q9H2A2 487 aaPredicted RBP13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
SDHDP1-201ENST00000588055 hCG_1984214I3L0E3 225 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 COBLO75128 1261 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 TAL1P17542 331 aaPredicted RBP13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 CALML3P27482 149 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 PDIA3P30101 505 aaKnown RBP13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 STK3Q13188 491 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 NOL8Q76FK4 1167 aaKnown RBP13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 MSL3Q8N5Y2 521 aaKnown RBP13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 ZNF713Q8N859 430 aaPredicted RBP13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 NPLOC4Q8TAT6 608 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 CUL5Q93034 780 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 MAML3Q96JK9 1138 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 ZNF333Q96JL9 665 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 TBC1D32Q96NH3 1257 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 SLKQ9H2G2 1235 aaPredicted RBP13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 CYP39A1Q9NYL5 469 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 CNPY2Q9Y2B0 182 aa13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 ZNFX1Q9P2E3 1918 aaKnown RBP13.72□□□□□ -0.21
SDHDP1-201ENST00000588055 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 B4DLN1 442 aa13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 MYCP01106 439 aaPredicted RBP13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 CCT2P78371 535 aaKnown RBP13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 CCL14Q16627 93 aa13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 ZNF792Q3KQV3 632 aa13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 RGS22Q8NE09 1264 aa13.71□□□□□ -0.21
SDHDP1-201ENST00000588055 SYNGAP1Q96PV0 1343 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 DNAJC25-GNG10A0A024R161 153 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 ASB14A6NK59 587 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 CFBP00751 764 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 CDC27P30260 824 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 ADD1P35611 737 aaKnown RBP13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 RPS6P62753 249 aaKnown RBP13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 BAATQ14032 418 aaPredicted RBP13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 PPP1R18Q6NYC8 613 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 SLC30A10Q6XR72 485 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 SAMD3Q8N6K7 520 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 CCDC12Q8WUD4 166 aaPredicted RBP13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 CLEC4DQ8WXI8 215 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 TINF2Q9BSI4 451 aa13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 RNF208Q9H0X6 261 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms