RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 PGAP2Q9UHJ9 254 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 SLC4A4Q9Y6R1 1079 aa6.62□□□□□ -1.35
SDF2-206ENST00000587788 NID2Q14112 1375 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 MYO3BQ8WXR4 1341 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 GPR75-ASB3A0A0A6YYF3 556 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 CARNS1A5YM72 827 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 CCDC69A6NI79 296 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 F8W031 263 aaPredicted RBP6.61□□□□□ -1.35
SDF2-206ENST00000587788 GOLGA6L19H0YKK7 550 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 ZBTB43O43298 467 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 FDPSP14324 419 aaKnown RBP6.61□□□□□ -1.35
SDF2-206ENST00000587788 RASA1P20936 1047 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 ME1P48163 572 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 STK38Q15208 465 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 SF3A1Q15459 793 aaKnown RBP6.61□□□□□ -1.35
SDF2-206ENST00000587788 ZRSR1Q15695 479 aaKnown RBP6.61□□□□□ -1.35
SDF2-206ENST00000587788 STX1AQ16623 288 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 TMEM67Q5HYA8 995 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 MFSD14BQ5SR56 506 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 AKNAD1Q5T1N1 836 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 FAM173BQ6P4H8 233 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 APOA5Q6Q788 366 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 NFXL1Q6ZNB6 911 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 MFSD6Q6ZSS7 791 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 AMOTL1Q8IY63 956 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 OGFOD1Q8N543 542 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 DNAJC5GQ8N7S2 189 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 IGDCC4Q8TDY8 1250 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 MRPS27Q92552 414 aaKnown RBP6.61□□□□□ -1.35
SDF2-206ENST00000587788 NAP1L5Q96NT1 182 aaPredicted RBP6.61□□□□□ -1.35
SDF2-206ENST00000587788 ZNF287Q9HBT7 754 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 ANO10Q9NW15 660 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 ANAPC4Q9UJX5 808 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 KIAA1024Q9UPX6 916 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 NOD1Q9Y239 953 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 MRVI1Q9Y6F6 885 aa6.61□□□□□ -1.35
SDF2-206ENST00000587788 SIPA1L1O43166 1804 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 ATAD5Q96QE3 1844 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 GSG1L2A8MUP6 293 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 WNT10BO00744 389 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 WNT7AO00755 349 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 IFIT3O14879 490 aaKnown RBP6.6□□□□□ -1.35
SDF2-206ENST00000587788 SPTLC2O15270 562 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 NEMFO60524 1076 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 PPP6R2O75170 966 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 MBD4O95243 580 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 CMA1P23946 247 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 CDC25BP30305 580 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 TDO2P48775 406 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 ZNF165P49910 485 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 ATP1A2P50993 1020 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 KIF23Q02241 960 aaPredicted RBP6.6□□□□□ -1.35
SDF2-206ENST00000587788 SSRP1Q08945 709 aaKnown RBP6.6□□□□□ -1.35
SDF2-206ENST00000587788 KCNA1Q09470 495 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 SAFBQ15424 915 aaKnown RBP eCLIP6.6□□□□□ -1.35
SDF2-206ENST00000587788 SBK1Q52WX2 424 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 OXLD1Q5BKU9 147 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 ANGEL2Q5VTE6 544 aaKnown RBP6.6□□□□□ -1.35
SDF2-206ENST00000587788 CST9Q5W186 159 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 CHST3Q7LGC8 479 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 TBC1D10CQ8IV04 446 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 TRIM22Q8IYM9 498 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 LINC00301Q8NCQ3 95 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 EHBP1Q8NDI1 1231 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 ENGASEQ8NFI3 743 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 ZBED3Q96IU2 234 aaPredicted RBP6.6□□□□□ -1.35
SDF2-206ENST00000587788 TIGD1Q96MW7 591 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 USP28Q96RU2 1077 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 RIOK1Q9BRS2 568 aaKnown RBP6.6□□□□□ -1.35
SDF2-206ENST00000587788 LY9Q9HBG7 655 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 PCDHB11Q9Y5F2 797 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 PCDHGA11Q9Y5H2 935 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 SSC5DA1L4H1 1573 aa6.6□□□□□ -1.35
SDF2-206ENST00000587788 MYH1P12882 1939 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 TCHHQ07283 1943 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 GOLGA8AA7E2F4 631 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 B4E1Z4 1266 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 MYO1BO43795 1136 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 CALM1P0DP23 149 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 CALM2P0DP24 149 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 CALM3P0DP25 149 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 IFNAR1P17181 557 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 U2AF2P26368 475 aaKnown RBP eCLIP6.59□□□□□ -1.35
SDF2-206ENST00000587788 PRDX5P30044 214 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 GRM5P41594 1212 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 TPM4P67936 248 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 GNL2Q13823 731 aaKnown RBP6.59□□□□□ -1.35
SDF2-206ENST00000587788 WTAPQ15007 396 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 SLC39A14Q15043 492 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 CAMK4Q16566 473 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 ANO6Q4KMQ2 910 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 CCDC178Q5BJE1 867 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 ANO1Q5XXA6 986 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 SARM1Q6SZW1 724 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 CYB5R4Q7L1T6 521 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 VASH1Q7L8A9 365 aaPredicted RBP6.59□□□□□ -1.35
SDF2-206ENST00000587788 KRT26Q7Z3Y9 468 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 ANKMY2Q8IV38 441 aa6.59□□□□□ -1.35
SDF2-206ENST00000587788 ELOA2Q8IYF1 753 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms