RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 PSRC1Q6PGN9 363 aaPredicted RBP18.55■□□□□ 0.56
NCLN-203ENST00000587740 CCDC174Q6PII3 467 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 ARMCX2Q7L311 632 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 STK11IPQ8N1F8 1099 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 ADAMTS19Q8TE59 1207 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 HERVK_113Q902F9 699 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 IL23AQ9NPF7 189 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 YBX2Q9Y2T7 364 aaKnown RBP18.55■□□□□ 0.56
NCLN-203ENST00000587740 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 IGKV6D-41A0A0C4DH26 115 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.54■□□□□ 0.56
NCLN-203ENST00000587740 BEX3Q00994 111 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 CCDC144CPQ8IYA2 1237 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 IFNL3Q8IZI9 196 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 SLC43A3Q8NBI5 491 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 RUFY2Q8WXA3 655 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 NKX2-4Q9H2Z4 354 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 SPC25Q9HBM1 224 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 SLC38A10Q9HBR0 1119 aa18.54■□□□□ 0.56
NCLN-203ENST00000587740 ARPP21Q9UBL0 812 aaPredicted RBP18.54■□□□□ 0.56
NCLN-203ENST00000587740 TCF20Q9UGU0 1960 aaKnown RBP18.53■□□□□ 0.56
NCLN-203ENST00000587740 XIRP2A4UGR9 3374 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 MYH4Q9Y623 1939 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 ZBED4O75132 1171 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 IGFBP4P22692 258 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 PTGS1P23219 599 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 CHMLP26374 656 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 MRPS5P82675 430 aaKnown RBP18.53■□□□□ 0.56
NCLN-203ENST00000587740 CNTN2Q02246 1040 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 SBK1Q52WX2 424 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 ZNF589Q86UQ0 364 aaPredicted RBP18.53■□□□□ 0.56
NCLN-203ENST00000587740 ANKRD35Q8N283 1001 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 KIFC2Q96AC6 838 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 NAPBQ9H115 298 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 EPB41L4AQ9HCS5 686 aaPredicted RBP18.53■□□□□ 0.56
NCLN-203ENST00000587740 CLIP2Q9UDT6 1046 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 MSRAQ9UJ68 235 aa18.53■□□□□ 0.56
NCLN-203ENST00000587740 GRIN2DO15399 1336 aa18.52■□□□□ 0.56
NCLN-203ENST00000587740 MINDY4BA8MYZ0 360 aa18.52■□□□□ 0.56
NCLN-203ENST00000587740 TLR3O15455 904 aaKnown RBP18.52■□□□□ 0.56
NCLN-203ENST00000587740 RAB30Q15771 203 aa18.52■□□□□ 0.56
NCLN-203ENST00000587740 VWCEQ96DN2 955 aa18.52■□□□□ 0.56
NCLN-203ENST00000587740 UHRF1Q96T88 793 aaPredicted RBP18.52■□□□□ 0.56
NCLN-203ENST00000587740 TRANK1O15050 2925 aa18.51■□□□□ 0.55
NCLN-203ENST00000587740 FGBP02675 491 aa18.51■□□□□ 0.55
NCLN-203ENST00000587740 HSPD1P10809 573 aaKnown RBP18.51■□□□□ 0.55
NCLN-203ENST00000587740 VPS53Q5VIR6 699 aa18.51■□□□□ 0.55
NCLN-203ENST00000587740 CXCL17Q6UXB2 119 aa18.51■□□□□ 0.55
NCLN-203ENST00000587740 OTOP2Q7RTS6 562 aa18.51■□□□□ 0.55
NCLN-203ENST00000587740 FAM133AQ8N9E0 248 aa18.51■□□□□ 0.55
NCLN-203ENST00000587740 CHST13Q8NET6 341 aa18.51■□□□□ 0.55
NCLN-203ENST00000587740 GNEQ9Y223 722 aaKnown RBP18.51■□□□□ 0.55
NCLN-203ENST00000587740 RAD50Q92878 1312 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 RABGGTBP53611 331 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 CCL23P55773 120 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 MKL1Q969V6 931 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 HIPK3Q9H422 1215 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 SLC28A3Q9HAS3 691 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 MKNK2Q9HBH9 465 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 HOMER2Q9NSB8 354 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 FBXO40Q9UH90 709 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 FEM1BQ9UK73 627 aa18.5■□□□□ 0.55
NCLN-203ENST00000587740 DDX49Q9Y6V7 483 aaKnown RBP18.5■□□□□ 0.55
NCLN-203ENST00000587740 PRRC2BQ5JSZ5 2229 aaKnown RBP18.5■□□□□ 0.55
NCLN-203ENST00000587740 SOWAHBA6NEL2 793 aa18.49■□□□□ 0.55
NCLN-203ENST00000587740 MYOGP15173 224 aa18.49■□□□□ 0.55
NCLN-203ENST00000587740 OAZ1P54368 228 aa18.49■□□□□ 0.55
NCLN-203ENST00000587740 TNFAIP2Q03169 654 aa18.49■□□□□ 0.55
NCLN-203ENST00000587740 ALX1Q15699 326 aa18.49■□□□□ 0.55
NCLN-203ENST00000587740 LRRC47Q8N1G4 583 aaKnown RBP18.49■□□□□ 0.55
NCLN-203ENST00000587740 CEP95Q96GE4 821 aa18.49■□□□□ 0.55
NCLN-203ENST00000587740 NECAB3Q96P71 396 aaPredicted RBP18.49■□□□□ 0.55
NCLN-203ENST00000587740 NOC4LQ9BVI4 516 aaKnown RBP18.49■□□□□ 0.55
NCLN-203ENST00000587740 TRPV6Q9H1D0 765 aa18.49■□□□□ 0.55
NCLN-203ENST00000587740 WNT8AQ9H1J5 351 aa18.49■□□□□ 0.55
NCLN-203ENST00000587740 CTDP1Q9Y5B0 961 aaPredicted RBP18.49■□□□□ 0.55
NCLN-203ENST00000587740 FOXP2O15409 715 aa18.48■□□□□ 0.55
NCLN-203ENST00000587740 PRDM1O75626 825 aa18.48■□□□□ 0.55
NCLN-203ENST00000587740 ITGA7Q13683 1181 aa18.48■□□□□ 0.55
NCLN-203ENST00000587740 TMEM63BQ5T3F8 832 aa18.48■□□□□ 0.55
NCLN-203ENST00000587740 A1CFQ9NQ94 594 aaKnown RBP18.48■□□□□ 0.55
NCLN-203ENST00000587740 MTMR4Q9NYA4 1195 aa18.48■□□□□ 0.55
NCLN-203ENST00000587740 LAMA4Q16363 1823 aa18.48■□□□□ 0.55
NCLN-203ENST00000587740 ZNF536O15090 1300 aa18.48■□□□□ 0.55
NCLN-203ENST00000587740 B4GALT4O60513 344 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 FGAP02671 866 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 SLC3A2P08195 630 aaKnown RBP18.47■□□□□ 0.55
NCLN-203ENST00000587740 BMP1P13497 986 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 SMPD1P17405 629 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 TFF2Q03403 129 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 CASC1Q6TDU7 716 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
NCLN-203ENST00000587740 TLK2Q86UE8 772 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 GMCL1P1Q8NEA9 526 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 AGBL1Q96MI9 1066 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 MTIF3Q9H2K0 278 aaKnown RBP18.47■□□□□ 0.55
NCLN-203ENST00000587740 PDGFCQ9NRA1 345 aa18.47■□□□□ 0.55
NCLN-203ENST00000587740 CABYRO75952 493 aa18.46■□□□□ 0.55
NCLN-203ENST00000587740 PSMC6P62333 389 aa18.46■□□□□ 0.55
NCLN-203ENST00000587740 PPARAQ07869 468 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms