RNA–Protein interactions for RNA: ENST00000587336.1

SMAD7-205, Transcript of SMAD family member 7, humanhuman

TSL 4

Gene SMAD7, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-205ENST00000587336 SYNE3Q6ZMZ3 975 aa13.15□□□□□ -0.3
SMAD7-205ENST00000587336 TMEM179Q6ZVK1 233 aa13.15□□□□□ -0.3
SMAD7-205ENST00000587336 STK11IPQ8N1F8 1099 aa13.15□□□□□ -0.3
SMAD7-205ENST00000587336 SPATC1LQ9H0A9 340 aa13.15□□□□□ -0.3
SMAD7-205ENST00000587336 ARHGEF10LQ9HCE6 1279 aa13.15□□□□□ -0.3
SMAD7-205ENST00000587336 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
SMAD7-205ENST00000587336 DDX20Q9UHI6 824 aaKnown RBP13.15□□□□□ -0.3
SMAD7-205ENST00000587336 ANAPC4Q9UJX5 808 aa13.15□□□□□ -0.3
SMAD7-205ENST00000587336 CNPY2Q9Y2B0 182 aa13.15□□□□□ -0.3
SMAD7-205ENST00000587336 PARP14Q460N5 1801 aa13.15□□□□□ -0.3
SMAD7-205ENST00000587336 NEDD4P46934 1319 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 A0A0G2JMZ2 1700 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 FIBPO43427 364 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
SMAD7-205ENST00000587336 COL6A1P12109 1028 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 ERCC3P19447 782 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 ZNF445P59923 1031 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 UBE2HP62256 183 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 PPARAQ07869 468 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 TMEM67Q5HYA8 995 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 TJAP1Q5JTD0 557 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 NFXL1Q6ZNB6 911 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 NCAPG2Q86XI2 1143 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 TRPV1Q8NER1 839 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 GPT2Q8TD30 523 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 ATG4CQ96DT6 458 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 DDX11Q96FC9 970 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 TOMM22Q9NS69 142 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
SMAD7-205ENST00000587336 CCDC69A6NI79 296 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 USP17L12C9JPN9 530 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 USP17L21D6R901 530 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 ZBTB43O43298 467 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 DSG3P32926 999 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 LIFRP42702 1097 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 CDK8P49336 464 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 NT5C2P49902 561 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 METAP2P50579 478 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMAD7-205ENST00000587336 CTDSPL2Q05D32 466 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 ZSCAN23Q3MJ62 389 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 PRAMEF19Q5SWL8 479 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 GJC2Q5T442 439 aaPredicted RBP13.13□□□□□ -0.31
SMAD7-205ENST00000587336 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 RGS22Q8NE09 1264 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 ESR2Q92731 530 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 SCAND2PQ9GZW5 306 aaPredicted RBP13.13□□□□□ -0.31
SMAD7-205ENST00000587336 ATP8A2Q9NTI2 1148 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 ELP1O95163 1332 aa13.13□□□□□ -0.31
SMAD7-205ENST00000587336 SMCHD1A6NHR9 2005 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 ZNF236Q9UL36 1845 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 IFIT3O14879 490 aaKnown RBP13.12□□□□□ -0.31
SMAD7-205ENST00000587336 COBLO75128 1261 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 KDM4AO75164 1064 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 CTDNEP1O95476 244 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 HOXC6P09630 235 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 CYBAP13498 195 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 DNM1Q05193 864 aaKnown RBP13.12□□□□□ -0.31
SMAD7-205ENST00000587336 RRP12Q5JTH9 1297 aaKnown RBP13.12□□□□□ -0.31
SMAD7-205ENST00000587336 C12orf60Q5U649 245 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 SGMS1Q86VZ5 419 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 SIAH1Q8IUQ4 282 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 TMTC2Q8N394 836 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 MYLIPQ8WY64 445 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 LPAR1Q92633 364 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 NCOA5Q9HCD5 579 aaKnown RBP13.12□□□□□ -0.31
SMAD7-205ENST00000587336 ARPP21Q9UBL0 812 aaPredicted RBP13.12□□□□□ -0.31
SMAD7-205ENST00000587336 CFAP45Q9UL16 551 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 BRPF3Q9ULD4 1205 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 TMX2Q9Y320 296 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 PLXNA1Q9UIW2 1896 aa13.12□□□□□ -0.31
SMAD7-205ENST00000587336 NID2Q14112 1375 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 MSCO60682 206 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 LETM1O95202 739 aaPredicted RBP13.11□□□□□ -0.31
SMAD7-205ENST00000587336 EEF2P13639 858 aaKnown RBP13.11□□□□□ -0.31
SMAD7-205ENST00000587336 RCAN1P53805 252 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 RESTQ13127 1097 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 WTAPQ15007 396 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 SEMA6BQ9H3T3 888 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 GRPEL1Q9HAV7 217 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 GDPD2Q9HCC8 539 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
SMAD7-205ENST00000587336 FBXO28Q9NVF7 368 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 ATP11BQ9Y2G3 1177 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 SLC12A7Q9Y666 1083 aa13.11□□□□□ -0.31
SMAD7-205ENST00000587336 GOLGA6L4A6NEF3 574 aa13.1□□□□□ -0.31
SMAD7-205ENST00000587336 DNM1LO00429 736 aa13.1□□□□□ -0.31
SMAD7-205ENST00000587336 WDR46O15213 610 aaKnown RBP13.1□□□□□ -0.31
SMAD7-205ENST00000587336 STRNO43815 780 aa13.1□□□□□ -0.31
SMAD7-205ENST00000587336 RTP1P59025 263 aa13.1□□□□□ -0.31
SMAD7-205ENST00000587336 TMEM132BQ14DG7 1078 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms