RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 ZKSCAN3Q9BRR0 538 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 RANBP17Q9H2T7 1088 aaKnown RBP12.52□□□□□ -0.41
ZNF540-205ENST00000587220 CYP39A1Q9NYL5 469 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 PNMA2Q9UL42 364 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 LTBP2Q14767 1821 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 NEDD4P46934 1319 aa12.52□□□□□ -0.41
ZNF540-205ENST00000587220 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 KDM4AO75164 1064 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 CLTBP09497 229 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 IRX6P78412 446 aaPredicted RBP12.51□□□□□ -0.41
ZNF540-205ENST00000587220 TNFAIP2Q03169 654 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 CCDC178Q5BJE1 867 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 GNASQ5JWF2 1037 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 GPR153Q6NV75 609 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 BTNL9Q6UXG8 535 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 DSCC1Q9BVC3 393 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 KAT14Q9H8E8 782 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 PDLIM7Q9NR12 457 aa12.51□□□□□ -0.41
ZNF540-205ENST00000587220 ADD3Q9UEY8 706 aaKnown RBP12.51□□□□□ -0.41
ZNF540-205ENST00000587220 PTPDC1A2A3K4 754 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 DCDC2CA8MYV0 355 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 B4E1Z4 1266 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 RAG1P15918 1043 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 ZNF543Q08ER8 600 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 GPATCH4Q5T3I0 446 aaKnown RBP12.5□□□□□ -0.41
ZNF540-205ENST00000587220 EEPD1Q7L9B9 569 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 DGKHQ86XP1 1220 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 DEFB123Q8N688 67 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 KLHDC9Q8NEP7 349 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 BADQ92934 168 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 MPHOSPH6Q99547 160 aaKnown RBP12.5□□□□□ -0.41
ZNF540-205ENST00000587220 UBAC1Q9BSL1 405 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 KRT23Q9C075 422 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 AP5M1Q9H0R1 490 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 TMEM39AQ9NV64 488 aa12.5□□□□□ -0.41
ZNF540-205ENST00000587220 MROH7Q68CQ1 1323 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 MYADML2A6NDP7 307 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 ADCY6O43306 1168 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 ASGR1P07306 291 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 CALML3P27482 149 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 CST5P28325 142 aaPredicted RBP12.49□□□□□ -0.41
ZNF540-205ENST00000587220 GJA9P57773 515 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 BAATQ14032 418 aaPredicted RBP12.49□□□□□ -0.41
ZNF540-205ENST00000587220 TTC22Q5TAA0 569 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 SH3RF1Q7Z6J0 888 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 FBXO16Q8IX29 292 aaPredicted RBP12.49□□□□□ -0.41
ZNF540-205ENST00000587220 PNMA1Q8ND90 353 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 RUFY2Q8WXA3 655 aa12.49□□□□□ -0.41
ZNF540-205ENST00000587220 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
ZNF540-205ENST00000587220 ELP1O95163 1332 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 TRIM43BA6NCK2 446 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 NFIBO00712 420 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 DHX16O60231 1041 aaKnown RBP12.48□□□□□ -0.41
ZNF540-205ENST00000587220 SNHG28P0DPA3 235 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 USH1GQ495M9 461 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 RNF207Q6ZRF8 634 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 ANKRD33Q7Z3H0 272 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 TLK2Q86UE8 772 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 TRIM43Q96BQ3 446 aaPredicted RBP12.48□□□□□ -0.41
ZNF540-205ENST00000587220 PURBQ96QR8 312 aaKnown RBP12.48□□□□□ -0.41
ZNF540-205ENST00000587220 KATNBL1Q9H079 304 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 UPF3AQ9H1J1 476 aaKnown RBP12.48□□□□□ -0.41
ZNF540-205ENST00000587220 VTA1Q9NP79 307 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 ZSWIM5Q9P217 1185 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 LRRC37A2A6NM11 1700 aa12.48□□□□□ -0.41
ZNF540-205ENST00000587220 ASTN1O14525 1302 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 TNKSO95271 1327 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 WDR19Q8NEZ3 1342 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 RAD50Q92878 1312 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 A0A0U1RQG5 324 aaPredicted RBP12.47□□□□□ -0.41
ZNF540-205ENST00000587220 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.47□□□□□ -0.41
ZNF540-205ENST00000587220 B4DLN1 442 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 KIAA0355O15063 1070 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 ZEB2O60315 1214 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 PDE4AP27815 886 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 MRPL12P52815 198 aaKnown RBP12.47□□□□□ -0.41
ZNF540-205ENST00000587220 IRX5P78411 483 aaPredicted RBP12.47□□□□□ -0.41
ZNF540-205ENST00000587220 BEX3Q00994 111 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 TRDNQ13061 729 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 SHHQ15465 462 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 FSCN1Q16658 493 aaKnown RBP12.47□□□□□ -0.41
ZNF540-205ENST00000587220 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 IQSEC1Q6DN90 963 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 CCSAPQ6IQ19 270 aaPredicted RBP12.47□□□□□ -0.41
ZNF540-205ENST00000587220 SLC30A10Q6XR72 485 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 KIAA1211Q6ZU35 1233 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 Q7L0L9 218 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 ENAHQ8N8S7 591 aaPredicted RBP12.47□□□□□ -0.41
ZNF540-205ENST00000587220 TOX2Q96NM4 488 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 UBA5Q9GZZ9 404 aa12.47□□□□□ -0.41
ZNF540-205ENST00000587220 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
ZNF540-205ENST00000587220 COL6A3P12111 3177 aa12.46□□□□□ -0.41
ZNF540-205ENST00000587220 LOC102724159A0A0B4J2E5 919 aa12.46□□□□□ -0.41
ZNF540-205ENST00000587220 TLR3O15455 904 aaKnown RBP12.46□□□□□ -0.41
ZNF540-205ENST00000587220 DYNC1LI2O43237 492 aaPredicted RBP12.46□□□□□ -0.41
ZNF540-205ENST00000587220 PARP1P09874 1014 aaKnown RBP12.46□□□□□ -0.41
ZNF540-205ENST00000587220 GSPT1P15170 499 aaKnown RBP12.46□□□□□ -0.41
ZNF540-205ENST00000587220 SMPD1P17405 629 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms