RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 DPF2Q92785 391 aa17.17■□□□□ 0.34
LDLRAD4-205ENST00000585931 SECISBP2LQ93073 1101 aaKnown RBP17.17■□□□□ 0.34
LDLRAD4-205ENST00000585931 NAT10Q9H0A0 1025 aaKnown RBP17.17■□□□□ 0.34
LDLRAD4-205ENST00000585931 EDIL3O43854 480 aa17.16■□□□□ 0.34
LDLRAD4-205ENST00000585931 CAP2P40123 477 aa17.16■□□□□ 0.34
LDLRAD4-205ENST00000585931 SNAP25P60880 206 aa17.16■□□□□ 0.34
LDLRAD4-205ENST00000585931 UBE2SQ16763 222 aa17.16■□□□□ 0.34
LDLRAD4-205ENST00000585931 TBC1D10BQ4KMP7 808 aaPredicted RBP17.16■□□□□ 0.34
LDLRAD4-205ENST00000585931 DTHD1Q6ZMT9 781 aa17.16■□□□□ 0.34
LDLRAD4-205ENST00000585931 TEPSINQ96N21 525 aa17.16■□□□□ 0.34
LDLRAD4-205ENST00000585931 TMX2Q9Y320 296 aa17.16■□□□□ 0.34
LDLRAD4-205ENST00000585931 BECN2A8MW95 431 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 GOLGA6L19H0YKK7 550 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 MSNP26038 577 aaKnown RBP17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 LONP1P36776 959 aaKnown RBP17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 TNNI2P48788 182 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 KANK3Q6NY19 840 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 AOPEPQ8N6M6 819 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 ARHGEF10LQ9HCE6 1279 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 HOOK1Q9UJC3 728 aaKnown RBP17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 SYNPO2Q9UMS6 1093 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 ZNF541Q9H0D2 1346 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 SLFN14P0C7P3 912 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 BMP6P22004 513 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 SARSP49591 514 aaKnown RBP17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 NT5DC1Q5TFE4 455 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 CUL5Q93034 780 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 GTPBP4Q9BZE4 634 aaKnown RBP17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 PSTPIP2Q9H939 334 aa17.15■□□□□ 0.34
LDLRAD4-205ENST00000585931 LAD1O00515 517 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 IKQ13123 557 aaPredicted RBP17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 E2F4Q16254 413 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 SH3RF1Q7Z6J0 888 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 PHF20L1A8MW92 1017 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 AFMP43652 599 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 MRPL12P52815 198 aaKnown RBP17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 SYDE2Q5VT97 1194 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 BTNL9Q6UXG8 535 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 CCDC84Q86UT8 332 aaPredicted RBP17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 PAGE5Q96GU1 130 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 GLIS2Q9BZE0 524 aaPredicted RBP17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 HACL1Q9UJ83 578 aa17.14■□□□□ 0.33
LDLRAD4-205ENST00000585931 PP2D1A8MPX8 630 aa17.13■□□□□ 0.33
LDLRAD4-205ENST00000585931 NEMFO60524 1076 aa17.13■□□□□ 0.33
LDLRAD4-205ENST00000585931 PRPHP41219 470 aa17.13■□□□□ 0.33
LDLRAD4-205ENST00000585931 TNFAIP1Q13829 316 aa17.13■□□□□ 0.33
LDLRAD4-205ENST00000585931 SPATA20Q8TB22 786 aa17.13■□□□□ 0.33
LDLRAD4-205ENST00000585931 MAN1B1Q9UKM7 699 aa17.13■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L15C9J2P7 530 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L13C9JLJ4 530 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L11C9JVI0 530 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L18D6R9N7 530 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L22D6RA61 530 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L17D6RBQ6 530 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L19D6RCP7 530 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L20D6RJB6 530 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 OR52Z1P0C646 297 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 CASP1P29466 404 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L24Q0WX57 530 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 USP17L6PQ6QN14 398 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 PLA2G4DQ86XP0 818 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 SMARCE1Q969G3 411 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 GOPCQ9HD26 462 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 CCDC39Q9UFE4 941 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 SMCHD1A6NHR9 2005 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 ZNF500O60304 480 aaPredicted RBP17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 OFD1O75665 1012 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 PTMAP06454 111 aaKnown RBP17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 ZYXQ15942 572 aaKnown RBP17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 KIF4BQ2VIQ3 1234 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 ARHGAP27Q6ZUM4 889 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 IQUBQ8NA54 791 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 STAMQ92783 540 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 DEFB129Q9H1M3 183 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 SPON1Q9HCB6 807 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 PRR12Q9ULL5 1215 aa17.12■□□□□ 0.33
LDLRAD4-205ENST00000585931 TDP2O95551 362 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 ASNSP08243 561 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 TAL1P17542 331 aaPredicted RBP17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 NCAPHQ15003 741 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 KARSQ15046 597 aaKnown RBP17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 PDXDC2PQ6P474 469 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 MTRQ99707 1265 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 SLC37A4O43826 429 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 ZNF75DP51815 510 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 STAT2P52630 851 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 MORC3Q14149 939 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 USH1GQ495M9 461 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 FBXO11Q86XK2 927 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 VCPKMTQ9H867 229 aa17.11■□□□□ 0.33
LDLRAD4-205ENST00000585931 MYH7BA7E2Y1 1941 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms