RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 KCNA10Q16322 511 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 NCOA7Q8NI08 942 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 DDX11Q96FC9 970 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 CEP95Q96GE4 821 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 INCENPQ9NQS7 918 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 TBX21Q9UL17 535 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 NEDD4P46934 1319 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 DUSP11O75319 330 aaKnown RBP27.14■■□□□ 1.94
LSM7-203ENST00000585409 NECTIN1Q15223 517 aa27.14■■□□□ 1.94
LSM7-203ENST00000585409 CREB3L3Q68CJ9 461 aa27.14■■□□□ 1.94
LSM7-203ENST00000585409 CLIP2Q9UDT6 1046 aa27.14■■□□□ 1.94
LSM7-203ENST00000585409 STX8Q9UNK0 236 aa27.14■■□□□ 1.94
LSM7-203ENST00000585409 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.13■■□□□ 1.93
LSM7-203ENST00000585409 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.13■■□□□ 1.93
LSM7-203ENST00000585409 MYADML2A6NDP7 307 aa27.13■■□□□ 1.93
LSM7-203ENST00000585409 KDM4AO75164 1064 aa27.13■■□□□ 1.93
LSM7-203ENST00000585409 TIMP1P01033 207 aa27.13■■□□□ 1.93
LSM7-203ENST00000585409 MCCP23508 829 aa27.13■■□□□ 1.93
LSM7-203ENST00000585409 MKL1Q969V6 931 aa27.13■■□□□ 1.93
LSM7-203ENST00000585409 TTC14Q96N46 770 aa27.13■■□□□ 1.93
LSM7-203ENST00000585409 B4E1Z4 1266 aa27.12■■□□□ 1.93
LSM7-203ENST00000585409 E7EWF7 191 aa27.12■■□□□ 1.93
LSM7-203ENST00000585409 SLC27A2O14975 620 aa27.12■■□□□ 1.93
LSM7-203ENST00000585409 DNAJB2P25686 324 aa27.12■■□□□ 1.93
LSM7-203ENST00000585409 CDK7P50613 346 aa27.12■■□□□ 1.93
LSM7-203ENST00000585409 KRT32Q14532 448 aa27.12■■□□□ 1.93
LSM7-203ENST00000585409 FGD4Q96M96 766 aa27.12■■□□□ 1.93
LSM7-203ENST00000585409 UBAC1Q9BSL1 405 aa27.12■■□□□ 1.93
LSM7-203ENST00000585409 ZHX1Q9UKY1 873 aaPredicted RBP27.12■■□□□ 1.93
LSM7-203ENST00000585409 ELP1O95163 1332 aa27.12■■□□□ 1.93
LSM7-203ENST00000585409 ADCY6O43306 1168 aa27.11■■□□□ 1.93
LSM7-203ENST00000585409 ACVR2BQ13705 512 aa27.11■■□□□ 1.93
LSM7-203ENST00000585409 GRIN2CQ14957 1233 aa27.11■■□□□ 1.93
LSM7-203ENST00000585409 SART3Q15020 963 aaKnown RBP27.11■■□□□ 1.93
LSM7-203ENST00000585409 UPF3AQ9H1J1 476 aaKnown RBP27.11■■□□□ 1.93
LSM7-203ENST00000585409 SLC38A10Q9HBR0 1119 aa27.11■■□□□ 1.93
LSM7-203ENST00000585409 MROH7Q68CQ1 1323 aa27.11■■□□□ 1.93
LSM7-203ENST00000585409 TTC28Q96AY4 2481 aa27.1■■□□□ 1.93
LSM7-203ENST00000585409 ZBED4O75132 1171 aa27.1■■□□□ 1.93
LSM7-203ENST00000585409 IRX5P78411 483 aaPredicted RBP27.1■■□□□ 1.93
LSM7-203ENST00000585409 MFSD5Q6N075 450 aa27.1■■□□□ 1.93
LSM7-203ENST00000585409 CPXCR1Q8N123 301 aa27.1■■□□□ 1.93
LSM7-203ENST00000585409 GLT1D1Q96MS3 346 aa27.1■■□□□ 1.93
LSM7-203ENST00000585409 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.1■■□□□ 1.938e-8■■□□□ 12
LSM7-203ENST00000585409 ABHD16BQ9H3Z7 469 aa27.1■■□□□ 1.93
LSM7-203ENST00000585409 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.1■■□□□ 1.93
LSM7-203ENST00000585409 ERICH2A1L162 156 aa27.09■■□□□ 1.93
LSM7-203ENST00000585409 TOP1P11387 765 aaKnown RBP27.09■■□□□ 1.93
LSM7-203ENST00000585409 GJA9P57773 515 aa27.09■■□□□ 1.93
LSM7-203ENST00000585409 DGKHQ86XP1 1220 aa27.09■■□□□ 1.93
LSM7-203ENST00000585409 PCSK9Q8NBP7 692 aaKnown RBP27.09■■□□□ 1.93
LSM7-203ENST00000585409 RAVER2Q9HCJ3 691 aaKnown RBP27.09■■□□□ 1.93
LSM7-203ENST00000585409 ASGR1P07306 291 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 C6orf222P0C671 652 aaPredicted RBP27.08■■□□□ 1.93
LSM7-203ENST00000585409 OAZ1P54368 228 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 CCDC144BQ3MJ40 725 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 RASIP1Q5U651 963 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 C16orf59Q7L2K0 433 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 GMCL1P1Q8NEA9 526 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 ZSCAN10Q96SZ4 725 aaPredicted RBP27.08■■□□□ 1.93
LSM7-203ENST00000585409 IL17RBQ9NRM6 502 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 ZSWIM5Q9P217 1185 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 FBXO40Q9UH90 709 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 FEM1BQ9UK73 627 aa27.08■■□□□ 1.93
LSM7-203ENST00000585409 NKX3-2P78367 333 aa27.07■■□□□ 1.92
LSM7-203ENST00000585409 CHST13Q8NET6 341 aa27.07■■□□□ 1.92
LSM7-203ENST00000585409 SYMPKQ92797 1274 aaKnown RBP27.07■■□□□ 1.92
LSM7-203ENST00000585409 KIFC2Q96AC6 838 aa27.07■■□□□ 1.92
LSM7-203ENST00000585409 TIFAQ96CG3 184 aa27.07■■□□□ 1.92
LSM7-203ENST00000585409 KATNBL1Q9H079 304 aa27.07■■□□□ 1.92
LSM7-203ENST00000585409 ZNF576Q9H609 170 aa27.07■■□□□ 1.92
LSM7-203ENST00000585409 NOVP48745 357 aa27.06■■□□□ 1.92
LSM7-203ENST00000585409 SLC4A3P48751 1232 aa27.06■■□□□ 1.92
LSM7-203ENST00000585409 PPIGQ13427 754 aaKnown RBP eCLIP27.06■■□□□ 1.927e-10■□□□□ 8.5
LSM7-203ENST00000585409 TSGA10IPQ3SY00 556 aa27.06■■□□□ 1.92
LSM7-203ENST00000585409 TMEM240Q5SV17 173 aa27.06■■□□□ 1.92
LSM7-203ENST00000585409 ARMCX2Q7L311 632 aa27.06■■□□□ 1.92
LSM7-203ENST00000585409 LRRC47Q8N1G4 583 aaKnown RBP27.06■■□□□ 1.92
LSM7-203ENST00000585409 ANKRD35Q8N283 1001 aa27.06■■□□□ 1.92
LSM7-203ENST00000585409 USP38Q8NB14 1042 aa27.06■■□□□ 1.92
LSM7-203ENST00000585409 MTA3Q9BTC8 594 aa27.06■■□□□ 1.92
LSM7-203ENST00000585409 A0A0U1RQG5 324 aaPredicted RBP27.05■■□□□ 1.92
LSM7-203ENST00000585409 ARVCFO00192 962 aa27.05■■□□□ 1.92
LSM7-203ENST00000585409 CTAGE5O15320 804 aa27.05■■□□□ 1.92
LSM7-203ENST00000585409 NMT2O60551 498 aa27.05■■□□□ 1.92
LSM7-203ENST00000585409 HSPA4P34932 840 aa27.05■■□□□ 1.92
LSM7-203ENST00000585409 FAM126BQ8IXS8 530 aa27.05■■□□□ 1.92
LSM7-203ENST00000585409 SPC25Q9HBM1 224 aa27.05■■□□□ 1.92
LSM7-203ENST00000585409 PRDM6Q9NQX0 595 aa27.05■■□□□ 1.92
LSM7-203ENST00000585409 CTDP1Q9Y5B0 961 aaPredicted RBP27.05■■□□□ 1.92
LSM7-203ENST00000585409 HMGB1P09429 215 aaKnown RBP27.04■■□□□ 1.92
LSM7-203ENST00000585409 MCM5P33992 734 aa27.04■■□□□ 1.92
LSM7-203ENST00000585409 SLFN13Q68D06 897 aa27.04■■□□□ 1.92
LSM7-203ENST00000585409 CCDC174Q6PII3 467 aa27.04■■□□□ 1.92
LSM7-203ENST00000585409 KAT14Q9H8E8 782 aa27.04■■□□□ 1.92
LSM7-203ENST00000585409 TNKSO95271 1327 aa27.04■■□□□ 1.92
LSM7-203ENST00000585409 LRRC37A2A6NM11 1700 aa27.04■■□□□ 1.92
LSM7-203ENST00000585409 MYO9BQ13459 2157 aa27.04■■□□□ 1.92
LSM7-203ENST00000585409 CSF2RAP15509 400 aa27.03■■□□□ 1.92
LSM7-203ENST00000585409 GNASQ5JWF2 1037 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms