RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 CXCL17Q6UXB2 119 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 FAM160B2Q86V87 743 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 IFNL3Q8IZI9 196 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 FAM133AQ8N9E0 248 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 NEDD1Q8NHV4 660 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 CHMP4CQ96CF2 233 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 KATNBL1Q9H079 304 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 SLC28A3Q9HAS3 691 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
CASC3-210ENST00000584997 CTAGE5O15320 804 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 FGBP02675 491 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 NKX3-2P78367 333 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 TFAP4Q01664 338 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 ITGA7Q13683 1181 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
CASC3-210ENST00000584997 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 STAG1Q8WVM7 1258 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 ATXN2LQ8WWM7 1075 aaKnown RBP12.35□□□□□ -0.43
CASC3-210ENST00000584997 HERVK_113Q902F9 699 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 AGBL1Q96MI9 1066 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 NAPBQ9H115 298 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 CXXC1Q9P0U4 656 aaPredicted RBP12.35□□□□□ -0.43
CASC3-210ENST00000584997 GNEQ9Y223 722 aaKnown RBP12.35□□□□□ -0.43
CASC3-210ENST00000584997 ASTN1O14525 1302 aa12.35□□□□□ -0.43
CASC3-210ENST00000584997 SOWAHBA6NEL2 793 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 DYNC1LI2O43237 492 aaPredicted RBP12.34□□□□□ -0.43
CASC3-210ENST00000584997 MCCP23508 829 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 CCL23P55773 120 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 CCDC85BQ15834 202 aaPredicted RBP12.34□□□□□ -0.43
CASC3-210ENST00000584997 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 OTOP2Q7RTS6 562 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
CASC3-210ENST00000584997 GMCL1Q96IK5 515 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 SEZ6LQ9BYH1 1024 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 NKX2-4Q9H2Z4 354 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 RCAN3Q9UKA8 241 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 STX8Q9UNK0 236 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 MUC3AQ02505 3323 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 ZNF536O15090 1300 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 UMODL1Q5DID0 1318 aa12.34□□□□□ -0.43
CASC3-210ENST00000584997 BDP1A6H8Y1 2624 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 SMPD1P17405 629 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 PPARAQ07869 468 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 NSMFQ6X4W1 530 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 SLC43A3Q8NBI5 491 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 SEC62Q99442 399 aaKnown RBP12.33□□□□□ -0.44
CASC3-210ENST00000584997 NOC4LQ9BVI4 516 aaKnown RBP12.33□□□□□ -0.44
CASC3-210ENST00000584997 PDGFCQ9NRA1 345 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 CHD7Q9P2D1 2997 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 LCTP09848 1927 aa12.33□□□□□ -0.44
CASC3-210ENST00000584997 ZBBXA8MT70 800 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 ERC2O15083 957 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 B4GALT4O60513 344 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 PLA2G6O60733 806 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 COL9A1P20849 921 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 PTGS1P23219 599 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 PSMC6P62333 389 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 MRPS5P82675 430 aaKnown RBP12.32□□□□□ -0.44
CASC3-210ENST00000584997 ADGRE1Q14246 886 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 MUM1L1Q5H9M0 696 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 C20orf194Q5TEA3 1177 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 PPP2R2DQ66LE6 453 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 IQSEC1Q6DN90 963 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 RPUSD2Q8IZ73 545 aaKnown RBP12.32□□□□□ -0.44
CASC3-210ENST00000584997 ADAMTS19Q8TE59 1207 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 FSD1Q9BTV5 496 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 TRPV6Q9H1D0 765 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
CASC3-210ENST00000584997 CYP39A1Q9NYL5 469 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 CCPG1Q9ULG6 757 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 MTMR7Q9Y216 660 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 YBX2Q9Y2T7 364 aaKnown RBP12.32□□□□□ -0.44
CASC3-210ENST00000584997 Q9Y3F1 56 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 SLC4A7Q9Y6M7 1214 aa12.32□□□□□ -0.44
CASC3-210ENST00000584997 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
CASC3-210ENST00000584997 SNAP25P60880 206 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 RCSD1Q6JBY9 416 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 TAPT1Q6NXT6 567 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 MICALL1Q8N3F8 863 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 SCLYQ96I15 445 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 UHRF1Q96T88 793 aaPredicted RBP12.31□□□□□ -0.44
CASC3-210ENST00000584997 WNT8AQ9H1J5 351 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 DCTPP1Q9H773 170 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 VTA1Q9NP79 307 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 PRR12Q9ULL5 1215 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 GRIN2DO15399 1336 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 TTC41PQ6P2S7 1318 aa12.31□□□□□ -0.44
CASC3-210ENST00000584997 NMT2O60551 498 aa12.3□□□□□ -0.44
CASC3-210ENST00000584997 SUPT20HL2P0C7V6 817 aa12.3□□□□□ -0.44
CASC3-210ENST00000584997 RABGGTBP53611 331 aa12.3□□□□□ -0.44
CASC3-210ENST00000584997 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms