RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 FBXL16Q8N461 479 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 PYM1Q9BRP8 204 aaKnown RBP12.64□□□□□ -0.39
TOP3A-217ENST00000584582 DDX25Q9UHL0 483 aaKnown RBP12.64□□□□□ -0.39
TOP3A-217ENST00000584582 CTAGE9A4FU28 777 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 ALDH1B1P30837 517 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 DDR1Q08345 913 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 SHROOM1Q2M3G4 852 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-217ENST00000584582 RDH13Q8NBN7 331 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 LRRN4CLQ8ND94 238 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 TTLL1O95922 423 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 PABPC4Q13310 644 aaKnown RBP eCLIP12.63□□□□□ -0.39
TOP3A-217ENST00000584582 TRIML1Q8N9V2 468 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-217ENST00000584582 BARHL2Q9NY43 387 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 TRPM3Q9HCF6 1732 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-217ENST00000584582 ERCC5P28715 1186 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-217ENST00000584582 USP8P40818 1118 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 GRM4Q14833 912 aa12.63□□□□□ -0.39
TOP3A-217ENST00000584582 SMCR8Q8TEV9 937 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-217ENST00000584582 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-217ENST00000584582 SFI1A8K8P3 1242 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 GH2P01242 217 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 STAT3P40763 770 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 FXR1P51114 621 aaKnown RBP eCLIP12.62□□□□□ -0.39
TOP3A-217ENST00000584582 HSP90B2PQ58FF3 399 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 TUBGCP2Q9BSJ2 902 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 TFRCP02786 760 aaKnown RBP12.62□□□□□ -0.39
TOP3A-217ENST00000584582 CRKP46108 304 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 FBXO38Q6PIJ6 1188 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 RRAGAQ7L523 313 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.62□□□□□ -0.39
TOP3A-217ENST00000584582 GJA3Q9Y6H8 435 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 ARFGEF2Q9Y6D5 1785 aa12.62□□□□□ -0.39
TOP3A-217ENST00000584582 ZMYND10O75800 440 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 PDE6BP35913 854 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 NOP2P46087 812 aaKnown RBP12.61□□□□□ -0.39
TOP3A-217ENST00000584582 ZFPM1Q8IX07 1006 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 SLC35F6Q8N357 371 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 GOLGA6L1Q8N7Z2 621 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
TOP3A-217ENST00000584582 CNOT6LQ96LI5 555 aaKnown RBP12.61□□□□□ -0.39
TOP3A-217ENST00000584582 RTFDC1Q9BY42 306 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-217ENST00000584582 A0A0U1RQJ8 604 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 NEDD1Q8NHV4 660 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 ATRIPQ8WXE1 791 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 CENPHQ9H3R5 247 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 EEF2P13639 858 aaKnown RBP12.61□□□□□ -0.39
TOP3A-217ENST00000584582 TM4SF1P30408 202 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 TRAPPC10P48553 1259 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 STK4Q13043 487 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 ZNF658Q5TYW1 1059 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-217ENST00000584582 TPH2Q8IWU9 490 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 SPAG5Q96R06 1193 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 CHP1Q99653 195 aa12.61□□□□□ -0.39
TOP3A-217ENST00000584582 DDX4Q9NQI0 724 aaKnown RBP12.61□□□□□ -0.39
TOP3A-217ENST00000584582 ALS2Q96Q42 1657 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 GOLGA6L9A6NEM1 432 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 STX10O60499 249 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 DPYDQ12882 1025 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 RAPGEF1Q13905 1077 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 ABCB5Q2M3G0 1257 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 GPBP1Q86WP2 473 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 SHISA4Q96DD7 197 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 SH2D3AQ9BRG2 576 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 TRIM10Q9UDY6 481 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 E9PMD0 336 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 STXBP3O00186 592 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 TBCAO75347 108 aaKnown RBP12.6□□□□□ -0.39
TOP3A-217ENST00000584582 KLK7P49862 253 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 SBK1Q52WX2 424 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 CCDC70Q6NSX1 233 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 COL23A1Q86Y22 540 aaPredicted RBP12.6□□□□□ -0.39
TOP3A-217ENST00000584582 LZTS2Q9BRK4 669 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.6□□□□□ -0.39
TOP3A-217ENST00000584582 PSDA5PKW4 1024 aaPredicted RBP12.6□□□□□ -0.39
TOP3A-217ENST00000584582 GTF2F1P35269 517 aaKnown RBP eCLIP12.6□□□□□ -0.39
TOP3A-217ENST00000584582 EN1Q05925 392 aaPredicted RBP12.6□□□□□ -0.39
TOP3A-217ENST00000584582 TCP11X2Q5H9J9 407 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 CDC42EP5Q6NZY7 148 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 CNNM4Q6P4Q7 775 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 LARP4BQ92615 738 aaKnown RBP12.6□□□□□ -0.39
TOP3A-217ENST00000584582 BPIFA3Q9BQP9 254 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 COA1Q9GZY4 146 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 MTMR4Q9NYA4 1195 aa12.6□□□□□ -0.39
TOP3A-217ENST00000584582 BICDL2A1A5D9 508 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 CTAGE15A4D2H0 777 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 CTAGE8P0CG41 777 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 KIF5AQ12840 1032 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 CYP26C1Q6V0L0 522 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 CTAGE6Q86UF2 777 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 FAM114A1Q8IWE2 563 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 CTAGE4Q8IX94 777 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 SYCP3Q8IZU3 236 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 KRT222Q8N1A0 295 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 TC2NQ8N9U0 490 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 OR8K1Q8NGG5 319 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms