RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 BICD2Q8TD16 824 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 PIGSQ96S52 555 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 MPHOSPH6Q99547 160 aaKnown RBP10.75□□□□□ -0.69
UBBP4-201ENST00000583708 RAVER2Q9HCJ3 691 aaKnown RBP10.75□□□□□ -0.69
UBBP4-201ENST00000583708 TXNRD2Q9NNW7 524 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 BARHL2Q9NY43 387 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 K7ELQ4 463 aaPredicted RBP10.74□□□□□ -0.69
UBBP4-201ENST00000583708 PIK3CDO00329 1044 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 HSPA1AP0DMV8 641 aaKnown RBP10.74□□□□□ -0.69
UBBP4-201ENST00000583708 HSPA1BP0DMV9 641 aaKnown RBP10.74□□□□□ -0.69
UBBP4-201ENST00000583708 CAPN2P17655 700 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 ERCC3P19447 782 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 PTPREP23469 700 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 CALML3P27482 149 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 PSMC4P43686 418 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 STK3Q13188 491 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 IRF5Q13568 498 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
UBBP4-201ENST00000583708 NCAPG2Q86XI2 1143 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 SMARCC2Q8TAQ2 1214 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 ZNF296Q8WUU4 475 aaPredicted RBP10.74□□□□□ -0.69
UBBP4-201ENST00000583708 NUDT12Q9BQG2 462 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 RNF146Q9NTX7 359 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 CNTNAP5Q8WYK1 1306 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 RLFQ13129 1914 aa10.74□□□□□ -0.69
UBBP4-201ENST00000583708 TNPO2O14787 897 aaKnown RBP10.73□□□□□ -0.69
UBBP4-201ENST00000583708 FOSP01100 380 aaPredicted RBP10.73□□□□□ -0.69
UBBP4-201ENST00000583708 HSPA8P11142 646 aaKnown RBP10.73□□□□□ -0.69
UBBP4-201ENST00000583708 ALAS1P13196 640 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 PDCP20941 246 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 RGS2P41220 211 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 GRB14Q14449 540 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 SLC35G1Q2M3R5 365 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 CCDC174Q6PII3 467 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 SAMD1Q6SPF0 538 aaPredicted RBP10.73□□□□□ -0.69
UBBP4-201ENST00000583708 GPR142Q7Z601 462 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 HOMER1Q86YM7 354 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 ANKRD35Q8N283 1001 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 CCDC82Q8N4S0 544 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 NSUN7Q8NE18 718 aaKnown RBP10.73□□□□□ -0.69
UBBP4-201ENST00000583708 DNERQ8NFT8 737 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 CUL5Q93034 780 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 AGBL1Q96MI9 1066 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 MMP19Q99542 508 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 SLC26A6Q9BXS9 759 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 R3HDMLQ9H3Y0 253 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 EFCC1Q9HA90 598 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 NCOA5Q9HCD5 579 aaKnown RBP10.73□□□□□ -0.69
UBBP4-201ENST00000583708 C6orf50Q9HD87 102 aa10.73□□□□□ -0.69
UBBP4-201ENST00000583708 ORC3Q9UBD5 711 aaPredicted RBP10.73□□□□□ -0.69
UBBP4-201ENST00000583708 ADD3Q9UEY8 706 aaKnown RBP10.73□□□□□ -0.69
UBBP4-201ENST00000583708 DNAJC25-GNG10A0A024R161 153 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 GCOM1H8Y6P7 765 aaPredicted RBP10.72□□□□□ -0.69
UBBP4-201ENST00000583708 FOXN1O15353 648 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 POLR2MP0CAP2 368 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 TRIM29Q14134 588 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 PKN1Q16512 942 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 MORN1Q5T089 497 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 XRRA1Q6P2D8 792 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 RASGRP2Q7LDG7 609 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 NECAB1Q8N987 351 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 FAM184AQ8NB25 1140 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 PXYLP1Q8TE99 480 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 CLEC4DQ8WXI8 215 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 USP6NLQ92738 828 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 IWS1Q96ST2 819 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 LARP6Q9BRS8 491 aaKnown RBP10.72□□□□□ -0.69
UBBP4-201ENST00000583708 ZMYND12Q9H0C1 365 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 PORCNQ9H237 461 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 CPVLQ9H3G5 476 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 PSTPIP2Q9H939 334 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 EHMT1Q9H9B1 1298 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 SRRDQ9UH36 339 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 NRBP1Q9UHY1 535 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 GJD2Q9UKL4 321 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 RIPK3Q9Y572 518 aa10.72□□□□□ -0.69
UBBP4-201ENST00000583708 A0A0G2JMZ2 1700 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 PTPDC1A2A3K4 754 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 POTEB2H3BUK9 544 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 STXBP3O00186 592 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 CTDNEP1O95476 244 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 HSD17B4P51659 736 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 NAPAP54920 295 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 AP3B2Q13367 1082 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 OLFML2BQ68BL8 750 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 RNF207Q6ZRF8 634 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 HEATR3Q7Z4Q2 680 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 CTU1Q7Z7A3 348 aaKnown RBP10.71□□□□□ -0.69
UBBP4-201ENST00000583708 DPP9Q86TI2 863 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 RAB11FIP4Q86YS3 637 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 CCDC83Q8IWF9 413 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 CMTR1Q8N1G2 835 aaKnown RBP10.71□□□□□ -0.69
UBBP4-201ENST00000583708 DAGLBQ8NCG7 672 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 PHKBQ93100 1093 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 TRIM47Q96LD4 638 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 BRMS1Q9HCU9 246 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms