RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTC1-211ENST00000583254 CPXCR1Q8N123 301 aa8.5□□□□□ -1.05
CTC1-211ENST00000583254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTC1-211ENST00000583254 PPP1R13LQ8WUF5 828 aa8.5□□□□□ -1.05
CTC1-211ENST00000583254 ZNF512BQ96KM6 892 aaPredicted RBP8.5□□□□□ -1.05
CTC1-211ENST00000583254 TGS1Q96RS0 853 aaKnown RBP8.5□□□□□ -1.05
CTC1-211ENST00000583254 ZBED2Q9BTP6 218 aa8.5□□□□□ -1.05
CTC1-211ENST00000583254 CRNKL1Q9BZJ0 848 aaKnown RBP8.5□□□□□ -1.05
CTC1-211ENST00000583254 RAVER2Q9HCJ3 691 aaKnown RBP8.5□□□□□ -1.05
CTC1-211ENST00000583254 GPR108Q9NPR9 543 aa8.5□□□□□ -1.05
CTC1-211ENST00000583254 SWAP70Q9UH65 585 aa8.5□□□□□ -1.05
CTC1-211ENST00000583254 MUTYHQ9UIF7 546 aa8.5□□□□□ -1.05
CTC1-211ENST00000583254 MYO15AQ9UKN7 3530 aa8.5□□□□□ -1.05
CTC1-211ENST00000583254 PLXNA3P51805 1871 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 SPTBN4Q9H254 2564 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 GREB1LQ9C091 1923 aaPredicted RBP8.49□□□□□ -1.05
CTC1-211ENST00000583254 LINC01553A4QN01 128 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 C19orf67A6NJJ6 358 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 RBAK-RBAKDNI3L0D1 243 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 BAIAP3O94812 1187 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 IQCF3P0C7M6 154 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 SUPT20HL2P0C7V6 817 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 ERVK-21P61565 698 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 EP400NLQ6ZTU2 488 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 ADHFE1Q8IWW8 467 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 FBXO16Q8IX29 292 aaPredicted RBP8.49□□□□□ -1.05
CTC1-211ENST00000583254 API5Q9BZZ5 524 aaKnown RBP8.49□□□□□ -1.05
CTC1-211ENST00000583254 DCP1AQ9NPI6 582 aaPredicted RBP8.49□□□□□ -1.05
CTC1-211ENST00000583254 PDGFCQ9NRA1 345 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 HOMER2Q9NSB8 354 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 PRKAG3Q9UGI9 489 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 DBNLQ9UJU6 430 aaKnown RBP8.49□□□□□ -1.05
CTC1-211ENST00000583254 NOB1Q9ULX3 412 aaKnown RBP8.49□□□□□ -1.05
CTC1-211ENST00000583254 SCN10AQ9Y5Y9 1956 aa8.49□□□□□ -1.05
CTC1-211ENST00000583254 LCTP09848 1927 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 ATG2AQ2TAZ0 1938 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 TRIP12Q14669 1992 aaPredicted RBP8.48□□□□□ -1.05
CTC1-211ENST00000583254 CYP2D7A0A087X1C5 515 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 PITPNM1O00562 1244 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 OS9Q13438 667 aaPredicted RBP8.48□□□□□ -1.05
CTC1-211ENST00000583254 HERC4Q5GLZ8 1057 aaPredicted RBP8.48□□□□□ -1.05
CTC1-211ENST00000583254 FAM47CQ5HY64 1035 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 FAM117BQ6P1L5 589 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 EEPD1Q7L9B9 569 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 LCORLQ8N3X6 602 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 FAM133AQ8N9E0 248 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 RETREG2Q8NC44 543 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 FBXO22Q8NEZ5 403 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 C17orf80Q9BSJ5 609 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 UPF3BQ9BZI7 483 aaKnown RBP8.48□□□□□ -1.05
CTC1-211ENST00000583254 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
CTC1-211ENST00000583254 FBXO40Q9UH90 709 aa8.48□□□□□ -1.05
CTC1-211ENST00000583254 CTDP1Q9Y5B0 961 aaPredicted RBP8.48□□□□□ -1.05
CTC1-211ENST00000583254 ZFHX2Q9C0A1 2572 aaPredicted RBP8.47□□□□□ -1.05
CTC1-211ENST00000583254 MYH4Q9Y623 1939 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 SOWAHBA6NEL2 793 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 ATP2A1O14983 1001 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 ZBED4O75132 1171 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 GJB5O95377 273 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 MYL3P08590 195 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 PDE6AP16499 860 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 CDK8P49336 464 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 PURAQ00577 322 aaKnown RBP8.47□□□□□ -1.05
CTC1-211ENST00000583254 TCTN1Q2MV58 587 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 TIGD5Q53EQ6 642 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 TCEAL5Q5H9L2 206 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 TAPT1Q6NXT6 567 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 CHST13Q8NET6 341 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 KIFC2Q96AC6 838 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 MRPL38Q96DV4 380 aaKnown RBP8.47□□□□□ -1.05
CTC1-211ENST00000583254 CCDC17Q96LX7 622 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 CRBNQ96SW2 442 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 RAD9AQ99638 391 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 KANSL2Q9H9L4 492 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 FAM50BQ9Y247 325 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 VPS13AQ96RL7 3174 aa8.47□□□□□ -1.05
CTC1-211ENST00000583254 TMEM221A6NGB7 291 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 ASB14A6NK59 587 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 E9PSI1 815 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 M0R296 226 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 PRKAB2O43741 272 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 NDUFB10O96000 172 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 GNAI2P04899 355 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 BFSP2Q13515 415 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 GPNMBQ14956 572 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 CLUL1Q15846 466 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 NBPF20Q3BBV1 942 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 C16orf86Q6ZW13 317 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 RNF135Q8IUD6 432 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 SUGP1Q8IWZ8 645 aaKnown RBP8.46□□□□□ -1.06
CTC1-211ENST00000583254 PRPF38AQ8NAV1 312 aaKnown RBP8.46□□□□□ -1.06
CTC1-211ENST00000583254 EDAQ92838 391 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 PBXIP1Q96AQ6 731 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 PABPC5Q96DU9 382 aaKnown RBP8.46□□□□□ -1.06
CTC1-211ENST00000583254 PRRX2Q99811 253 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 ACAD9Q9H845 621 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 ARMT1Q9H993 441 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 SLC38A10Q9HBR0 1119 aa8.46□□□□□ -1.06
CTC1-211ENST00000583254 ALG13Q9NP73 1137 aaKnown RBP8.46□□□□□ -1.06
CTC1-211ENST00000583254 A1CFQ9NQ94 594 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms