RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 CNTNAP5Q8WYK1 1306 aa23.21■■□□□ 1.31
TOP3A-213ENST00000582230 COL11A1P12107 1806 aaPredicted RBP23.2■■□□□ 1.3
TOP3A-213ENST00000582230 IFNAR1P17181 557 aa23.2■■□□□ 1.3
TOP3A-213ENST00000582230 FLT3LGP49771 235 aa23.2■■□□□ 1.3
TOP3A-213ENST00000582230 PRKCZQ05513 592 aa23.2■■□□□ 1.3
TOP3A-213ENST00000582230 NTRK3Q16288 839 aa23.2■■□□□ 1.3
TOP3A-213ENST00000582230 ME3Q16798 604 aa23.2■■□□□ 1.3
TOP3A-213ENST00000582230 USH1GQ495M9 461 aa23.2■■□□□ 1.3
TOP3A-213ENST00000582230 PIBF1Q8WXW3 757 aa23.2■■□□□ 1.3
TOP3A-213ENST00000582230 ZSCAN31Q96LW9 406 aaPredicted RBP23.2■■□□□ 1.3
TOP3A-213ENST00000582230 PTPN22Q9Y2R2 807 aa23.2■■□□□ 1.3
TOP3A-213ENST00000582230 PCDHA1Q9Y5I3 950 aa23.2■■□□□ 1.3
TOP3A-213ENST00000582230 PPP1R11O60927 126 aaPredicted RBP23.19■■□□□ 1.3
TOP3A-213ENST00000582230 MCM2P49736 904 aa23.19■■□□□ 1.3
TOP3A-213ENST00000582230 SCRN1Q12765 414 aa23.19■■□□□ 1.3
TOP3A-213ENST00000582230 IRF5Q13568 498 aa23.19■■□□□ 1.3
TOP3A-213ENST00000582230 ANKRD35Q8N283 1001 aa23.19■■□□□ 1.3
TOP3A-213ENST00000582230 USP6NLQ92738 828 aa23.19■■□□□ 1.3
TOP3A-213ENST00000582230 SLC5A4Q9NY91 659 aa23.19■■□□□ 1.3
TOP3A-213ENST00000582230 GABRQQ9UN88 632 aa23.19■■□□□ 1.3
TOP3A-213ENST00000582230 V9GY48 417 aaPredicted RBP23.19■■□□□ 1.3
TOP3A-213ENST00000582230 CDKL5O76039 1030 aa23.18■■□□□ 1.3
TOP3A-213ENST00000582230 ADORA2AP29274 412 aa23.18■■□□□ 1.3
TOP3A-213ENST00000582230 RGS2P41220 211 aa23.18■■□□□ 1.3
TOP3A-213ENST00000582230 AKAP17AQ02040 695 aaKnown RBP23.18■■□□□ 1.3
TOP3A-213ENST00000582230 MAP2K5Q13163 448 aa23.18■■□□□ 1.3
TOP3A-213ENST00000582230 MUM1L1Q5H9M0 696 aa23.18■■□□□ 1.3
TOP3A-213ENST00000582230 RGS22Q8NE09 1264 aa23.18■■□□□ 1.3
TOP3A-213ENST00000582230 CLEC4DQ8WXI8 215 aa23.18■■□□□ 1.3
TOP3A-213ENST00000582230 DDX11Q96FC9 970 aa23.18■■□□□ 1.3
TOP3A-213ENST00000582230 RNF26Q9BY78 433 aaPredicted RBP23.18■■□□□ 1.3
TOP3A-213ENST00000582230 SH2B1Q9NRF2 756 aaPredicted RBP23.18■■□□□ 1.3
TOP3A-213ENST00000582230 CASP8AP2Q9UKL3 1982 aa23.18■■□□□ 1.3
TOP3A-213ENST00000582230 PFASO15067 1338 aa23.17■■□□□ 1.3
TOP3A-213ENST00000582230 PRPF3O43395 683 aaKnown RBP23.17■■□□□ 1.3
TOP3A-213ENST00000582230 HOXC6P09630 235 aa23.17■■□□□ 1.3
TOP3A-213ENST00000582230 XRCC5P13010 732 aaKnown RBP23.17■■□□□ 1.3
TOP3A-213ENST00000582230 FBXO46Q6PJ61 603 aaPredicted RBP23.17■■□□□ 1.3
TOP3A-213ENST00000582230 DPP9Q86TI2 863 aa23.17■■□□□ 1.3
TOP3A-213ENST00000582230 MCF2L2Q86YR7 1114 aa23.17■■□□□ 1.3
TOP3A-213ENST00000582230 TRIM22Q8IYM9 498 aa23.17■■□□□ 1.3
TOP3A-213ENST00000582230 RAET1EQ8TD07 263 aa23.17■■□□□ 1.3
TOP3A-213ENST00000582230 GTF3C6Q969F1 213 aa23.17■■□□□ 1.3
TOP3A-213ENST00000582230 NFIBO00712 420 aa23.16■■□□□ 1.3
TOP3A-213ENST00000582230 TAL1P17542 331 aaPredicted RBP23.16■■□□□ 1.3
TOP3A-213ENST00000582230 APBA2Q99767 749 aa23.16■■□□□ 1.3
TOP3A-213ENST00000582230 A1CFQ9NQ94 594 aaKnown RBP23.16■■□□□ 1.3
TOP3A-213ENST00000582230 hCG_1642624A0A1W2PR95 340 aa23.15■■□□□ 1.3
TOP3A-213ENST00000582230 hCG_1984214I3L0E3 225 aa23.15■■□□□ 1.3
TOP3A-213ENST00000582230 LARGE1O95461 756 aa23.15■■□□□ 1.3
TOP3A-213ENST00000582230 SSRP1Q08945 709 aaKnown RBP23.15■■□□□ 1.3
TOP3A-213ENST00000582230 NSMFQ6X4W1 530 aa23.15■■□□□ 1.3
TOP3A-213ENST00000582230 TRMT44Q8IYL2 757 aaKnown RBP23.15■■□□□ 1.3
TOP3A-213ENST00000582230 SAMD3Q8N6K7 520 aa23.15■■□□□ 1.3
TOP3A-213ENST00000582230 ZNF713Q8N859 430 aaPredicted RBP23.15■■□□□ 1.3
TOP3A-213ENST00000582230 NECAB1Q8N987 351 aa23.15■■□□□ 1.3
TOP3A-213ENST00000582230 PHKBQ93100 1093 aa23.15■■□□□ 1.3
TOP3A-213ENST00000582230 SLC26A6Q9BXS9 759 aa23.15■■□□□ 1.3
TOP3A-213ENST00000582230 DIS3Q9Y2L1 958 aaKnown RBP23.15■■□□□ 1.3
TOP3A-213ENST00000582230 MGAMO43451 1857 aa23.14■■□□□ 1.29
TOP3A-213ENST00000582230 DNAJC25-GNG10A0A024R161 153 aa23.14■■□□□ 1.29
TOP3A-213ENST00000582230 COBLO75128 1261 aa23.14■■□□□ 1.29
TOP3A-213ENST00000582230 CYP2B6P20813 491 aa23.14■■□□□ 1.29
TOP3A-213ENST00000582230 PFKFB3Q16875 520 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-213ENST00000582230 HEATR3Q7Z4Q2 680 aa23.14■■□□□ 1.29
TOP3A-213ENST00000582230 PXYLP1Q8TE99 480 aa23.14■■□□□ 1.29
TOP3A-213ENST00000582230 MAP3K20Q9NYL2 800 aaKnown RBP23.14■■□□□ 1.29
TOP3A-213ENST00000582230 CYP39A1Q9NYL5 469 aa23.14■■□□□ 1.29
TOP3A-213ENST00000582230 PTCH2Q9Y6C5 1203 aa23.14■■□□□ 1.29
TOP3A-213ENST00000582230 ZSWIM8A7E2V4 1837 aa23.14■■□□□ 1.29
TOP3A-213ENST00000582230 PGK2P07205 417 aa23.13■■□□□ 1.29
TOP3A-213ENST00000582230 ZNF792Q3KQV3 632 aa23.13■■□□□ 1.29
TOP3A-213ENST00000582230 RNF207Q6ZRF8 634 aa23.13■■□□□ 1.29
TOP3A-213ENST00000582230 SLAIN1Q8ND83 568 aa23.13■■□□□ 1.29
TOP3A-213ENST00000582230 PTPDC1A2A3K4 754 aa23.12■■□□□ 1.29
TOP3A-213ENST00000582230 POTEB2H3BUK9 544 aa23.12■■□□□ 1.29
TOP3A-213ENST00000582230 ADCY3O60266 1144 aa23.12■■□□□ 1.29
TOP3A-213ENST00000582230 SCG2P13521 617 aa23.12■■□□□ 1.29
TOP3A-213ENST00000582230 BAATQ14032 418 aaPredicted RBP23.12■■□□□ 1.29
TOP3A-213ENST00000582230 BARHL2Q9NY43 387 aa23.12■■□□□ 1.29
TOP3A-213ENST00000582230 ZNF236Q9UL36 1845 aa23.12■■□□□ 1.29
TOP3A-213ENST00000582230 CD2BP2O95400 341 aaKnown RBP23.11■■□□□ 1.29
TOP3A-213ENST00000582230 DEXIO95424 95 aa23.11■■□□□ 1.29
TOP3A-213ENST00000582230 RPS6P62753 249 aaKnown RBP23.11■■□□□ 1.29
TOP3A-213ENST00000582230 GHRHRQ02643 423 aa23.11■■□□□ 1.29
TOP3A-213ENST00000582230 PKN1Q16512 942 aa23.11■■□□□ 1.29
TOP3A-213ENST00000582230 WWC2Q6AWC2 1192 aa23.11■■□□□ 1.29
TOP3A-213ENST00000582230 PPP1R18Q6NYC8 613 aa23.11■■□□□ 1.29
TOP3A-213ENST00000582230 TEX2Q8IWB9 1127 aa23.11■■□□□ 1.29
TOP3A-213ENST00000582230 NPLOC4Q8TAT6 608 aa23.11■■□□□ 1.29
TOP3A-213ENST00000582230 LLPHQ9BRT6 129 aaKnown RBP23.11■■□□□ 1.29
TOP3A-213ENST00000582230 MCOLN1Q9GZU1 580 aa23.11■■□□□ 1.29
TOP3A-213ENST00000582230 STK36Q9NRP7 1315 aa23.1■■□□□ 1.29
TOP3A-213ENST00000582230 OPLAHO14841 1288 aa23.1■■□□□ 1.29
TOP3A-213ENST00000582230 CTDNEP1O95476 244 aa23.1■■□□□ 1.29
TOP3A-213ENST00000582230 GRK4P32298 578 aa23.1■■□□□ 1.29
TOP3A-213ENST00000582230 COL13A1Q5TAT6 717 aaPredicted RBP23.1■■□□□ 1.29
TOP3A-213ENST00000582230 OLFML2BQ68BL8 750 aa23.1■■□□□ 1.29
TOP3A-213ENST00000582230 ZNF467Q7Z7K2 595 aaPredicted RBP23.1■■□□□ 1.29
TOP3A-213ENST00000582230 FAM133AQ8N9E0 248 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms