RNA–Protein interactions for RNA: ENST00000581679.1

NDEL1-211, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-211ENST00000581679 ATG4DQ86TL0 474 aaPredicted RBP4.68□□□□□ -1.66
NDEL1-211ENST00000581679 SMC5Q8IY18 1101 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 PHACTR4Q8IZ21 702 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 FLAD1Q8NFF5 587 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 PKNOX2Q96KN3 472 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 ASPNQ9BXN1 380 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 PANK2Q9BZ23 570 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 CARS2Q9HA77 564 aaKnown RBP4.68□□□□□ -1.66
NDEL1-211ENST00000581679 ZSWIM5Q9P217 1185 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 PLCH2O75038 1416 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 VWDEQ8N2E2 1590 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 NRXN1Q9ULB1 1477 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 MAP3K4Q9Y6R4 1608 aa4.68□□□□□ -1.66
NDEL1-211ENST00000581679 ARAP3Q8WWN8 1544 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 SETBP1Q9Y6X0 1596 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 PAX4O43316 350 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 POLR2BP30876 1174 aaKnown RBP4.67□□□□□ -1.66
NDEL1-211ENST00000581679 TNNI2P48788 182 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 RBM25P49756 843 aaKnown RBP4.67□□□□□ -1.66
NDEL1-211ENST00000581679 HDLBPQ00341 1268 aaKnown RBP4.67□□□□□ -1.66
NDEL1-211ENST00000581679 GAB4Q2WGN9 574 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 ZKSCAN2Q63HK3 967 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 NLRC3Q7RTR2 1065 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 TCP11L2Q8N4U5 519 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 TMEM40Q8WWA1 233 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 ATG4CQ96DT6 458 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 CFAP53Q96M91 514 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 GBP4Q96PP9 640 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 C19orf73Q9NVV2 129 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 KCNH3Q9ULD8 1083 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 CTNND2Q9UQB3 1225 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 ABCA6Q8N139 1617 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 ZNF518AQ6AHZ1 1483 aa4.67□□□□□ -1.66
NDEL1-211ENST00000581679 NSD2O96028 1365 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 IBTKQ9P2D0 1353 aaPredicted RBP4.66□□□□□ -1.66
NDEL1-211ENST00000581679 ADGRB2O60241 1585 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 ARHGAP31Q2M1Z3 1444 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 NSD3Q9BZ95 1437 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
NDEL1-211ENST00000581679 TNFRSF10CO14798 259 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 NME1P15531 152 aaKnown RBP4.66□□□□□ -1.66
NDEL1-211ENST00000581679 RAG1P15918 1043 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 TPP2P29144 1249 aaPredicted RBP4.66□□□□□ -1.66
NDEL1-211ENST00000581679 GBP1P32455 592 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 TERF1P54274 439 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 RAB3GAP1Q15042 981 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 EFCAB2Q5VUJ9 269 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 CLEC17AQ6ZS10 378 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 TMPRSS7Q7RTY8 843 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 MORC1Q86VD1 984 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 TSPYL5Q86VY4 417 aaPredicted RBP4.66□□□□□ -1.66
NDEL1-211ENST00000581679 FTSJ3Q8IY81 847 aaKnown RBP4.66□□□□□ -1.66
NDEL1-211ENST00000581679 PUS7Q96PZ0 661 aaKnown RBP4.66□□□□□ -1.66
NDEL1-211ENST00000581679 TRIT1Q9H3H1 467 aaKnown RBP4.66□□□□□ -1.66
NDEL1-211ENST00000581679 ZNRF3Q9ULT6 936 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 DDX19BQ9UMR2 479 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 IL16Q14005 1332 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 KIF16BQ96L93 1317 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 ZFYVE16Q7Z3T8 1539 aa4.66□□□□□ -1.66
NDEL1-211ENST00000581679 ABCC11Q96J66 1382 aa4.65□□□□□ -1.66
NDEL1-211ENST00000581679 DIP2BQ9P265 1576 aa4.65□□□□□ -1.66
NDEL1-211ENST00000581679 REREQ9P2R6 1566 aa4.65□□□□□ -1.66
NDEL1-211ENST00000581679 TRAPPC8Q9Y2L5 1435 aa4.65□□□□□ -1.66
NDEL1-211ENST00000581679 SHISA3A0PJX4 238 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 BIN1O00499 593 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 CCNFP41002 786 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 NUCB1Q02818 461 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 CCDC173Q0VFZ6 552 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 PAK2Q13177 524 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 LRRFIP1Q32MZ4 808 aaKnown RBP4.65□□□□□ -1.67
NDEL1-211ENST00000581679 NBPF12Q5TAG4 269 aaPredicted RBP4.65□□□□□ -1.67
NDEL1-211ENST00000581679 ZNF654Q8IZM8 581 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 TNPO1Q92973 898 aaKnown RBP4.65□□□□□ -1.67
NDEL1-211ENST00000581679 TRIM44Q96DX7 344 aaPredicted RBP4.65□□□□□ -1.67
NDEL1-211ENST00000581679 ASIC4Q96FT7 647 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 ALPK1Q96QP1 1244 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 PPP1R9BQ96SB3 815 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.65□□□□□ -1.672e-17■■■■□ 21.3
NDEL1-211ENST00000581679 CCDC9Q9Y3X0 531 aaKnown RBP4.65□□□□□ -1.67
NDEL1-211ENST00000581679 RNF114Q9Y508 228 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.65□□□□□ -1.67
NDEL1-211ENST00000581679 IFT172Q9UG01 1749 aa4.65□□□□□ -1.67
NDEL1-211ENST00000581679 SPAG9O60271 1321 aaKnown RBP4.65□□□□□ -1.67
NDEL1-211ENST00000581679 INO80Q9ULG1 1556 aaPredicted RBP4.65□□□□□ -1.67
NDEL1-211ENST00000581679 NOS1P29475 1434 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 ZC3H13Q5T200 1668 aaKnown RBP4.64□□□□□ -1.67
NDEL1-211ENST00000581679 FANCAO15360 1455 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 GOLGA6L22H0YM25 854 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 HSP90AB1P08238 724 aaKnown RBP4.64□□□□□ -1.67
NDEL1-211ENST00000581679 TRIM27P14373 513 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 RNF4P78317 190 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 HS1BP3Q53T59 392 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 BMP2KLQ5H9B9 411 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 ATF7IPQ6VMQ6 1270 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 NT5DC4Q86YG4 428 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 CREG2Q8IUH2 290 aa4.64□□□□□ -1.67
NDEL1-211ENST00000581679 RASGRP4Q8TDF6 673 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms