RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 PTPREP23469 700 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 SLC4A3P48751 1232 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 PKN1Q16512 942 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 USH1GQ495M9 461 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 MUM1L1Q5H9M0 696 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 CPLX2Q6PUV4 134 aaKnown RBP17.47■□□□□ 0.39
MKS1-210ENST00000581180 TMX3Q96JJ7 454 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 ACAD9Q9H845 621 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 PRDM10Q9NQV6 1147 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 SEC63Q9UGP8 760 aaKnown RBP17.47■□□□□ 0.39
MKS1-210ENST00000581180 FBXO40Q9UH90 709 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 GJD2Q9UKL4 321 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 PCDHA1Q9Y5I3 950 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 STRNO43815 780 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 GNRH1P01148 92 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 GRB14Q14449 540 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 PFKFB3Q16875 520 aaPredicted RBP17.46■□□□□ 0.39
MKS1-210ENST00000581180 MORN1Q5T089 497 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 WDR78Q5VTH9 848 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 CCAR1Q8IX12 1150 aaKnown RBP17.46■□□□□ 0.39
MKS1-210ENST00000581180 ABRAQ8N0Z2 381 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
MKS1-210ENST00000581180 USP6NLQ92738 828 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 SNX21Q969T3 373 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 COA7Q96BR5 231 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 SLC26A6Q9BXS9 759 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 HOMER2Q9NSB8 354 aa17.46■□□□□ 0.39
MKS1-210ENST00000581180 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
MKS1-210ENST00000581180 SLC15A5A6NIM6 579 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 NFIBO00712 420 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 OPLAHO14841 1288 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 CDKL5O76039 1030 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 SSRP1Q08945 709 aaKnown RBP17.45■□□□□ 0.38
MKS1-210ENST00000581180 TRAF1Q13077 416 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 ARHGEF6Q15052 776 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 OTOP1Q7RTM1 612 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 SRRDQ9UH36 339 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 GABRQQ9UN88 632 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 MRPL11Q9Y3B7 192 aaKnown RBP17.45■□□□□ 0.38
MKS1-210ENST00000581180 STK36Q9NRP7 1315 aa17.45■□□□□ 0.38
MKS1-210ENST00000581180 DTNBO60941 627 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 FCER1AP12319 257 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 SCG2P13521 617 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 GHRHRQ02643 423 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 WWC2Q6AWC2 1192 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 TYW1BQ6NUM6 668 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 TRIM22Q8IYM9 498 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 RGS22Q8NE09 1264 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 GPKOWQ92917 476 aaPredicted RBP eCLIP17.44■□□□□ 0.38
MKS1-210ENST00000581180 MMP19Q99542 508 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 LLPHQ9BRT6 129 aaKnown RBP17.44■□□□□ 0.38
MKS1-210ENST00000581180 A1CFQ9NQ94 594 aaKnown RBP17.44■□□□□ 0.38
MKS1-210ENST00000581180 IVNS1ABPQ9Y6Y0 642 aa17.44■□□□□ 0.38
MKS1-210ENST00000581180 DNAJC25-GNG10A0A024R161 153 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 hCG_1984214I3L0E3 225 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 JAK2O60674 1132 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 DEXIO95424 95 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 FDPSP14324 419 aaKnown RBP17.43■□□□□ 0.38
MKS1-210ENST00000581180 HOXD10P28358 340 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 ADORA2AP29274 412 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 PRMT2P55345 433 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 AKAP17AQ02040 695 aaKnown RBP17.43■□□□□ 0.38
MKS1-210ENST00000581180 PRKCZQ05513 592 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 MAP2K5Q13163 448 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 KCTD2Q14681 263 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 ZNF713Q8N859 430 aaPredicted RBP17.43■□□□□ 0.38
MKS1-210ENST00000581180 SMARCC2Q8TAQ2 1214 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 SOCS4Q8WXH5 440 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 TBC1D5Q92609 795 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 NUDT12Q9BQG2 462 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 MAF1Q9H063 256 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 CWC22Q9HCG8 908 aaKnown RBP17.43■□□□□ 0.38
MKS1-210ENST00000581180 BARHL2Q9NY43 387 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 TRIM17Q9Y577 477 aa17.43■□□□□ 0.38
MKS1-210ENST00000581180 PTPDC1A2A3K4 754 aa17.42■□□□□ 0.38
MKS1-210ENST00000581180 STXBP3O00186 592 aa17.42■□□□□ 0.38
MKS1-210ENST00000581180 COBLO75128 1261 aa17.42■□□□□ 0.38
MKS1-210ENST00000581180 HOXC6P09630 235 aa17.42■□□□□ 0.38
MKS1-210ENST00000581180 FLT3LGP49771 235 aa17.42■□□□□ 0.38
MKS1-210ENST00000581180 HEATR3Q7Z4Q2 680 aa17.42■□□□□ 0.38
MKS1-210ENST00000581180 CTU1Q7Z7A3 348 aaKnown RBP17.42■□□□□ 0.38
MKS1-210ENST00000581180 ANKRD35Q8N283 1001 aa17.42■□□□□ 0.38
MKS1-210ENST00000581180 SHISA4Q96DD7 197 aa17.42■□□□□ 0.38
MKS1-210ENST00000581180 CYP39A1Q9NYL5 469 aa17.42■□□□□ 0.38
MKS1-210ENST00000581180 IRF5Q13568 498 aa17.41■□□□□ 0.38
MKS1-210ENST00000581180 CUL4AQ13619 759 aa17.41■□□□□ 0.38
MKS1-210ENST00000581180 BAATQ14032 418 aaPredicted RBP17.41■□□□□ 0.38
MKS1-210ENST00000581180 ZNF792Q3KQV3 632 aa17.41■□□□□ 0.38
MKS1-210ENST00000581180 PPP1R18Q6NYC8 613 aa17.41■□□□□ 0.38
MKS1-210ENST00000581180 NSMFQ6X4W1 530 aa17.41■□□□□ 0.38
MKS1-210ENST00000581180 FAM133AQ8N9E0 248 aa17.41■□□□□ 0.38
MKS1-210ENST00000581180 AIFM3Q96NN9 605 aa17.41■□□□□ 0.38
MKS1-210ENST00000581180 ORC3Q9UBD5 711 aaPredicted RBP17.41■□□□□ 0.38
MKS1-210ENST00000581180 PFASO15067 1338 aa17.41■□□□□ 0.38
MKS1-210ENST00000581180 K7ELQ4 463 aaPredicted RBP17.4■□□□□ 0.38
MKS1-210ENST00000581180 PGK2P07205 417 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 XRCC5P13010 732 aaKnown RBP17.4■□□□□ 0.38
MKS1-210ENST00000581180 RGS2P41220 211 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms