RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 BRF1Q92994 677 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 ZC3H12CQ9C0D7 883 aaKnown RBP7.35□□□□□ -1.23
PTPRM-213ENST00000580949 COA1Q9GZY4 146 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 NAPBQ9H115 298 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 C11orf16Q9NQ32 467 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 SH2B1Q9NRF2 756 aaPredicted RBP7.35□□□□□ -1.23
PTPRM-213ENST00000580949 AATFQ9NY61 560 aaKnown RBP eCLIP7.35□□□□□ -1.23
PTPRM-213ENST00000580949 LTBP1Q14766 1721 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 SNED1Q8TER0 1413 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 CACNA1SQ13698 1873 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 DOCK2Q92608 1830 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 NEDD4P46934 1319 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 B4E1Z4 1266 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 PRC1O43663 620 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 PFKFB2O60825 505 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 BRD1O95696 1058 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 CYP2D6P10635 497 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 EVCP57679 992 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 APOBRQ0VD83 1088 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 STK3Q13188 491 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 MFSD14BQ5SR56 506 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 CTR9Q6PD62 1173 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 TMED8Q6PL24 325 aaPredicted RBP7.34□□□□□ -1.23
PTPRM-213ENST00000580949 DZIP1Q86YF9 867 aaKnown RBP7.34□□□□□ -1.23
PTPRM-213ENST00000580949 FBXL16Q8N461 479 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 NCOA7Q8NI08 942 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 SH3RF3Q8TEJ3 882 aaPredicted RBP7.34□□□□□ -1.23
PTPRM-213ENST00000580949 ACDQ96AP0 544 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 CHAMP1Q96JM3 812 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 OXCT2Q9BYC2 517 aaPredicted RBP7.34□□□□□ -1.23
PTPRM-213ENST00000580949 NACAP1Q9BZK3 213 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 GDF2Q9UK05 429 aaPredicted RBP7.34□□□□□ -1.23
PTPRM-213ENST00000580949 BRPF3Q9ULD4 1205 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 DNMT3AQ9Y6K1 912 aaPredicted RBP7.34□□□□□ -1.23
PTPRM-213ENST00000580949 LRRC37AA6NMS7 1700 aa7.34□□□□□ -1.23
PTPRM-213ENST00000580949 QSER1Q2KHR3 1735 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 GPR75-ASB3A0A0A6YYF3 556 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 MINDY4BA8MYZ0 360 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 OPLAHO14841 1288 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 IGSF3O75054 1194 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 CTDNEP1O95476 244 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 PDIA3P30101 505 aaKnown RBP7.33□□□□□ -1.24
PTPRM-213ENST00000580949 MCM4P33991 863 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 MCM5P33992 734 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 TDO2P48775 406 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 RHBDL3P58872 404 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 GSTO1P78417 241 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 NUCB2P80303 420 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 PPARAQ07869 468 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 SPEM2Q0P670 501 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 FAM26DQ5JW98 314 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 AKNAD1Q5T1N1 836 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 ZNF468Q5VIY5 522 aaPredicted RBP7.33□□□□□ -1.24
PTPRM-213ENST00000580949 ZNF385CQ66K41 422 aaPredicted RBP7.33□□□□□ -1.24
PTPRM-213ENST00000580949 GIMAP6Q6P9H5 292 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 CLEC17AQ6ZS10 378 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 STK11IPQ8N1F8 1099 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 GOLGA6L1Q8N7Z2 621 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 TTLL6Q8N841 843 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 IGDCC4Q8TDY8 1250 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 STAG1Q8WVM7 1258 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 CRNKL1Q9BZJ0 848 aaKnown RBP7.33□□□□□ -1.24
PTPRM-213ENST00000580949 TMX4Q9H1E5 349 aaPredicted RBP7.33□□□□□ -1.24
PTPRM-213ENST00000580949 DBNDD1Q9H9R9 158 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 EFCC1Q9HA90 598 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 DCP1AQ9NPI6 582 aaPredicted RBP7.33□□□□□ -1.24
PTPRM-213ENST00000580949 ZSWIM5Q9P217 1185 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 EGFL7Q9UHF1 273 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 ANAPC4Q9UJX5 808 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 PRR12Q9ULL5 1215 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 SLX4Q8IY92 1834 aa7.33□□□□□ -1.24
PTPRM-213ENST00000580949 MROH7-TTC4A0A0A0MT08 1334 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 GAKO14976 1311 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 WDR19Q8NEZ3 1342 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 SH2B2O14492 632 aaPredicted RBP7.32□□□□□ -1.24
PTPRM-213ENST00000580949 ECE2O60344 883 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 JAK2O60674 1132 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 LDHCP07864 332 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 CELA2BP08218 269 aaPredicted RBP7.32□□□□□ -1.24
PTPRM-213ENST00000580949 FGRP09769 529 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 SYT1P21579 422 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 GRNP28799 593 aaKnown RBP7.32□□□□□ -1.24
PTPRM-213ENST00000580949 GJB2P29033 226 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 SCRN1Q12765 414 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 GRIN2CQ14957 1233 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 AOC3Q16853 763 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 LYPD4Q6UWN0 246 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 MFSD6Q6ZSS7 791 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 RALYLQ86SE5 291 aaKnown RBP7.32□□□□□ -1.24
PTPRM-213ENST00000580949 WHAMMQ8TF30 809 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 TBC1D22AQ8WUA7 517 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 FOXD4L4Q8WXT5 416 aaPredicted RBP7.32□□□□□ -1.24
PTPRM-213ENST00000580949 GTF3C6Q969F1 213 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 ZNF274Q96GC6 653 aaPredicted RBP7.32□□□□□ -1.24
PTPRM-213ENST00000580949 EYA3Q99504 573 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 SLC30A3Q99726 388 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 MTFR1LQ9H019 292 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 NCOA5Q9HCD5 579 aaKnown RBP7.32□□□□□ -1.24
PTPRM-213ENST00000580949 ATP8A2Q9NTI2 1148 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 FAM13BQ9NYF5 915 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms