RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 AP5M1Q9H0R1 490 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 WNT8AQ9H1J5 351 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 NAV1Q8NEY1 1877 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 ZNF532Q9HCE3 1301 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 EPOPA6NHQ4 379 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 PI4K2BG5E9Z4 385 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 ZEB2O60315 1214 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 B4GALT4O60513 344 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 ZBED4O75132 1171 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 MRE11P49959 708 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 ATP8B2P98198 1209 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 TTLL4Q14679 1199 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 TTF1Q15361 905 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-210ENST00000580713 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 ARMT1Q9H993 441 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 PPP4R2Q9NY27 417 aa12.87□□□□□ -0.35
TOP3A-210ENST00000580713 REV3LO60673 3130 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-210ENST00000580713 CTAGE5O15320 804 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 DYNC1LI2O43237 492 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-210ENST00000580713 PRKAB2O43741 272 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 ACTN1P12814 892 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 AAMPQ13685 434 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 FSCN1Q16658 493 aaKnown RBP12.86□□□□□ -0.35
TOP3A-210ENST00000580713 TLK2Q86UE8 772 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 AACSQ86V21 672 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 CHMP4BQ9H444 224 aaKnown RBP12.86□□□□□ -0.35
TOP3A-210ENST00000580713 C1orf115Q9H7X2 142 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 RAVER2Q9HCJ3 691 aaKnown RBP12.86□□□□□ -0.35
TOP3A-210ENST00000580713 XIRP2A4UGR9 3374 aa12.86□□□□□ -0.35
TOP3A-210ENST00000580713 PARP14Q460N5 1801 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 LRRC37A2A6NM11 1700 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
TOP3A-210ENST00000580713 KIF28PB7ZC32 967 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 PFKMP08237 780 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 PSMC6P62333 389 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 CSPP1Q1MSJ5 1256 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 PRPF38AQ8NAV1 312 aaKnown RBP12.85□□□□□ -0.35
TOP3A-210ENST00000580713 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 DDRGK1Q96HY6 314 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
TOP3A-210ENST00000580713 SEZ6LQ9BYH1 1024 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 CD320Q9NPF0 282 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 FBXO40Q9UH90 709 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 NOP58Q9Y2X3 529 aaKnown RBP12.85□□□□□ -0.35
TOP3A-210ENST00000580713 ASTN1O14525 1302 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 GRIN2DO15399 1336 aa12.85□□□□□ -0.35
TOP3A-210ENST00000580713 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 USP17L12C9JPN9 530 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 USP17L21D6R901 530 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 GOLIM4O00461 696 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 CYP2C9P11712 490 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 NKX3-2P78367 333 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 CNTN2Q02246 1040 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 TAP1Q03518 808 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 GRB10Q13322 594 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 C12orf60Q5U649 245 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 FGD4Q96M96 766 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 SLC9A7Q96T83 725 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 DNAJC2Q99543 621 aaKnown RBP12.84□□□□□ -0.35
TOP3A-210ENST00000580713 FTOQ9C0B1 505 aaKnown RBP eCLIP12.84□□□□□ -0.35
TOP3A-210ENST00000580713 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
TOP3A-210ENST00000580713 MCM3APO60318 1980 aa12.83□□□□□ -0.35
TOP3A-210ENST00000580713 F5H6K3 240 aa12.83□□□□□ -0.36
TOP3A-210ENST00000580713 MBD4O95243 580 aa12.83□□□□□ -0.36
TOP3A-210ENST00000580713 SUPT20HL2P0C7V6 817 aa12.83□□□□□ -0.36
TOP3A-210ENST00000580713 SSTR3P32745 418 aaPredicted RBP12.83□□□□□ -0.36
TOP3A-210ENST00000580713 KLRC3Q07444 240 aa12.83□□□□□ -0.36
TOP3A-210ENST00000580713 PDAP1Q13442 181 aaKnown RBP12.83□□□□□ -0.36
TOP3A-210ENST00000580713 CHST13Q8NET6 341 aa12.83□□□□□ -0.36
TOP3A-210ENST00000580713 VWCEQ96DN2 955 aa12.83□□□□□ -0.36
TOP3A-210ENST00000580713 KATNBL1Q9H079 304 aa12.83□□□□□ -0.36
TOP3A-210ENST00000580713 BCL11AQ9H165 835 aa12.83□□□□□ -0.36
TOP3A-210ENST00000580713 ALDH8A1Q9H2A2 487 aaPredicted RBP12.83□□□□□ -0.36
TOP3A-210ENST00000580713 MYH8P13535 1937 aa12.83□□□□□ -0.36
TOP3A-210ENST00000580713 TCRBV5S4A2TA0A5A2 114 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 ASB14A6NK59 587 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 ATP2A1O14983 1001 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 ARHGEF15O94989 841 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 NDUFB10O96000 172 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 PTGS1P23219 599 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 HERC6Q8IVU3 1022 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 GJD3Q8N144 294 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 SPRYD3Q8NCJ5 442 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 PHOSPHO2Q8TCD6 241 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 CCDC136Q96JN2 1154 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 SNX27Q96L92 541 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 TRMT13Q9NUP7 481 aaKnown RBP12.82□□□□□ -0.36
TOP3A-210ENST00000580713 ISY1Q9ULR0 285 aaKnown RBP12.82□□□□□ -0.36
TOP3A-210ENST00000580713 GNEQ9Y223 722 aaKnown RBP12.82□□□□□ -0.36
TOP3A-210ENST00000580713 TRANK1O15050 2925 aa12.82□□□□□ -0.36
TOP3A-210ENST00000580713 SMPD1P17405 629 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms