RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 TAL1P17542 331 aaPredicted RBP29.09■■■□□ 2.25
CDC42EP4-205ENST00000580315 SLC16A2P36021 539 aa29.09■■■□□ 2.25
CDC42EP4-205ENST00000580315 TLE2Q04725 743 aa29.09■■■□□ 2.25
CDC42EP4-205ENST00000580315 CCDC174Q6PII3 467 aa29.09■■■□□ 2.25
CDC42EP4-205ENST00000580315 ANKRD35Q8N283 1001 aa29.09■■■□□ 2.25
CDC42EP4-205ENST00000580315 NCOA7Q8NI08 942 aa29.09■■■□□ 2.25
CDC42EP4-205ENST00000580315 LSG1Q9H089 658 aaKnown RBP29.09■■■□□ 2.25
CDC42EP4-205ENST00000580315 ANO2Q9NQ90 1003 aa29.09■■■□□ 2.25
CDC42EP4-205ENST00000580315 E7EWF7 191 aa29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 PGK1P00558 417 aa29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 IFIT1BQ5T764 474 aaKnown RBP29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 ZNF697Q5TEC3 545 aa29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 RNF180Q86T96 592 aa29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 AGBL1Q96MI9 1066 aa29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 ACAD9Q9H845 621 aa29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 HOMER2Q9NSB8 354 aa29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 ZNFX1Q9P2E3 1918 aaKnown RBP29.08■■■□□ 2.25
CDC42EP4-205ENST00000580315 ZNF536O15090 1300 aa29.07■■■□□ 2.24
CDC42EP4-205ENST00000580315 RANBP17Q9H2T7 1088 aaKnown RBP29.07■■■□□ 2.24
CDC42EP4-205ENST00000580315 PPP4R2Q9NY27 417 aa29.07■■■□□ 2.24
CDC42EP4-205ENST00000580315 SMCHD1A6NHR9 2005 aa29.06■■■□□ 2.24
CDC42EP4-205ENST00000580315 ERICH2A1L162 156 aa29.06■■■□□ 2.24
CDC42EP4-205ENST00000580315 ZNF865P0CJ78 1059 aaPredicted RBP29.06■■■□□ 2.24
CDC42EP4-205ENST00000580315 SNAP25P60880 206 aa29.06■■■□□ 2.24
CDC42EP4-205ENST00000580315 SART3Q15020 963 aaKnown RBP29.06■■■□□ 2.24
CDC42EP4-205ENST00000580315 CYB5R4Q7L1T6 521 aa29.06■■■□□ 2.24
CDC42EP4-205ENST00000580315 RNF146Q9NTX7 359 aa29.06■■■□□ 2.24
CDC42EP4-205ENST00000580315 PNMA2Q9UL42 364 aa29.06■■■□□ 2.24
CDC42EP4-205ENST00000580315 CCPG1Q9ULG6 757 aa29.06■■■□□ 2.24
CDC42EP4-205ENST00000580315 ICAM1P05362 532 aa29.05■■■□□ 2.24
CDC42EP4-205ENST00000580315 ALAS1P13196 640 aa29.05■■■□□ 2.24
CDC42EP4-205ENST00000580315 TRERF1Q96PN7 1200 aa29.05■■■□□ 2.24
CDC42EP4-205ENST00000580315 CNPY2Q9Y2B0 182 aa29.05■■■□□ 2.24
CDC42EP4-205ENST00000580315 AKR1A1P14550 325 aa29.04■■■□□ 2.24
CDC42EP4-205ENST00000580315 ITGB8P26012 769 aa29.04■■■□□ 2.24
CDC42EP4-205ENST00000580315 ASPRV1Q53RT3 343 aa29.04■■■□□ 2.24
CDC42EP4-205ENST00000580315 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.04■■■□□ 2.24
CDC42EP4-205ENST00000580315 TAF6LQ9Y6J9 622 aa29.04■■■□□ 2.24
CDC42EP4-205ENST00000580315 A0A1W2PQ45 241 aaPredicted RBP29.03■■■□□ 2.24
CDC42EP4-205ENST00000580315 A0A1W2PQY0 241 aa29.03■■■□□ 2.24
CDC42EP4-205ENST00000580315 IFIT3O14879 490 aaKnown RBP29.03■■■□□ 2.24
CDC42EP4-205ENST00000580315 GOLGA8HP0CJ92 632 aa29.03■■■□□ 2.24
CDC42EP4-205ENST00000580315 SEC23AQ15436 765 aa29.03■■■□□ 2.24
CDC42EP4-205ENST00000580315 STOX1Q6ZVD7 989 aa29.03■■■□□ 2.24
CDC42EP4-205ENST00000580315 MSL3Q8N5Y2 521 aaKnown RBP29.03■■■□□ 2.24
CDC42EP4-205ENST00000580315 LENG1Q96BZ8 264 aaPredicted RBP29.03■■■□□ 2.24
CDC42EP4-205ENST00000580315 DNAJC25-GNG10A0A024R161 153 aa29.02■■■□□ 2.24
CDC42EP4-205ENST00000580315 CLTBP09497 229 aa29.02■■■□□ 2.24
CDC42EP4-205ENST00000580315 PARP1P09874 1014 aaKnown RBP29.02■■■□□ 2.24
CDC42EP4-205ENST00000580315 SMAD3P84022 425 aaKnown RBP29.02■■■□□ 2.24
CDC42EP4-205ENST00000580315 CDX2Q99626 313 aaPredicted RBP29.02■■■□□ 2.24
CDC42EP4-205ENST00000580315 SEMA6BQ9H3T3 888 aa29.02■■■□□ 2.24
CDC42EP4-205ENST00000580315 EYSQ5T1H1 3165 aa29.02■■■□□ 2.24
CDC42EP4-205ENST00000580315 ADAMTS4O75173 837 aa29.01■■■□□ 2.23
CDC42EP4-205ENST00000580315 SLC27A2O14975 620 aa29■■■□□ 2.23
CDC42EP4-205ENST00000580315 KIAA0355O15063 1070 aa29■■■□□ 2.23
CDC42EP4-205ENST00000580315 PQBP1O60828 265 aaKnown RBP29■■■□□ 2.23
CDC42EP4-205ENST00000580315 WTAPQ15007 396 aa29■■■□□ 2.23
CDC42EP4-205ENST00000580315 RNF20Q5VTR2 975 aa29■■■□□ 2.23
CDC42EP4-205ENST00000580315 CREB3L3Q68CJ9 461 aa29■■■□□ 2.23
CDC42EP4-205ENST00000580315 ZNF467Q7Z7K2 595 aaPredicted RBP29■■■□□ 2.23
CDC42EP4-205ENST00000580315 TSEN34Q9BSV6 310 aaKnown RBP29■■■□□ 2.23
CDC42EP4-205ENST00000580315 PLXNA1Q9UIW2 1896 aa29■■■□□ 2.23
CDC42EP4-205ENST00000580315 SYNGAP1Q96PV0 1343 aa28.99■■■□□ 2.23
CDC42EP4-205ENST00000580315 SNAI1O95863 264 aaPredicted RBP28.99■■■□□ 2.23
CDC42EP4-205ENST00000580315 NECTIN1Q15223 517 aa28.99■■■□□ 2.23
CDC42EP4-205ENST00000580315 MAMDC4Q6UXC1 1216 aa28.99■■■□□ 2.23
CDC42EP4-205ENST00000580315 MB21D2Q8IYB1 491 aaPredicted RBP28.99■■■□□ 2.23
CDC42EP4-205ENST00000580315 COL25A1Q9BXS0 654 aaPredicted RBP28.99■■■□□ 2.23
CDC42EP4-205ENST00000580315 UBA5Q9GZZ9 404 aa28.99■■■□□ 2.23
CDC42EP4-205ENST00000580315 A1CFQ9NQ94 594 aaKnown RBP28.99■■■□□ 2.23
CDC42EP4-205ENST00000580315 FAM184BQ9ULE4 1060 aa28.99■■■□□ 2.23
CDC42EP4-205ENST00000580315 ACLYP53396 1101 aa28.98■■■□□ 2.23
CDC42EP4-205ENST00000580315 EPHB4P54760 987 aa28.98■■■□□ 2.23
CDC42EP4-205ENST00000580315 TMEM67Q5HYA8 995 aa28.98■■■□□ 2.23
CDC42EP4-205ENST00000580315 TTYH1Q9H313 450 aaPredicted RBP28.98■■■□□ 2.23
CDC42EP4-205ENST00000580315 WDR19Q8NEZ3 1342 aa28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 SYNRGQ9UMZ2 1314 aa28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 CDH23Q9H251 3354 aa28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 DHX16O60231 1041 aaKnown RBP28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 RAG1P15918 1043 aa28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 MUM1L1Q5H9M0 696 aa28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 CHST3Q7LGC8 479 aa28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 ANKRD33Q7Z3H0 272 aa28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 KLHDC9Q8NEP7 349 aa28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 TMEM39AQ9NV64 488 aa28.97■■■□□ 2.23
CDC42EP4-205ENST00000580315 MCM5P33992 734 aa28.96■■■□□ 2.23
CDC42EP4-205ENST00000580315 NSMFQ6X4W1 530 aa28.96■■■□□ 2.23
CDC42EP4-205ENST00000580315 RNPC3Q96LT9 517 aaKnown RBP28.96■■■□□ 2.23
CDC42EP4-205ENST00000580315 TOX2Q96NM4 488 aa28.96■■■□□ 2.23
CDC42EP4-205ENST00000580315 MTA3Q9BTC8 594 aa28.96■■■□□ 2.23
CDC42EP4-205ENST00000580315 CPVLQ9H3G5 476 aa28.96■■■□□ 2.23
CDC42EP4-205ENST00000580315 STARD7Q9NQZ5 370 aa28.96■■■□□ 2.23
CDC42EP4-205ENST00000580315 ZHX1Q9UKY1 873 aaPredicted RBP28.96■■■□□ 2.23
CDC42EP4-205ENST00000580315 VCANP13611 3396 aa28.95■■■□□ 2.23
CDC42EP4-205ENST00000580315 MOXD2PA6NHM9 499 aa28.95■■■□□ 2.22
CDC42EP4-205ENST00000580315 ANTXR2P58335 489 aa28.95■■■□□ 2.22
CDC42EP4-205ENST00000580315 FAAP100Q0VG06 881 aa28.95■■■□□ 2.22
CDC42EP4-205ENST00000580315 KCNA10Q16322 511 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms