RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 MAP3K21Q5TCX8 1036 aa19.02■□□□□ 0.64
RARA-209ENST00000579727 BLOC1S2Q6QNY1 142 aa19.02■□□□□ 0.64
RARA-209ENST00000579727 MICU3Q86XE3 530 aa19.02■□□□□ 0.64
RARA-209ENST00000579727 CTCFLQ8NI51 663 aaPredicted RBP19.02■□□□□ 0.64
RARA-209ENST00000579727 SHISA4Q96DD7 197 aa19.02■□□□□ 0.64
RARA-209ENST00000579727 HMX1Q9NP08 348 aaPredicted RBP19.02■□□□□ 0.64
RARA-209ENST00000579727 CUL9Q8IWT3 2517 aa19.02■□□□□ 0.63
RARA-209ENST00000579727 RPTORQ8N122 1335 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 MCM3APO60318 1980 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 PLEKHA8P1O95397 391 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 SEC24BO95487 1268 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 CNGA1P29973 690 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 PRAMEF19Q5SWL8 479 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 OLFML2BQ68BL8 750 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 CMTR1Q8N1G2 835 aaKnown RBP19.01■□□□□ 0.63
RARA-209ENST00000579727 TRPV1Q8NER1 839 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 U2AF1L4Q8WU68 220 aaKnown RBP19.01■□□□□ 0.63
RARA-209ENST00000579727 PURBQ96QR8 312 aaKnown RBP19.01■□□□□ 0.63
RARA-209ENST00000579727 PIGSQ96S52 555 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 PAK6Q9NQU5 681 aaPredicted RBP19.01■□□□□ 0.63
RARA-209ENST00000579727 BRPF3Q9ULD4 1205 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 SLC12A7Q9Y666 1083 aa19.01■□□□□ 0.63
RARA-209ENST00000579727 BAZ2BQ9UIF8 2168 aaKnown RBP19■□□□□ 0.63
RARA-209ENST00000579727 WDR19Q8NEZ3 1342 aa19■□□□□ 0.63
RARA-209ENST00000579727 DNAJC25-GNG10A0A024R161 153 aa19■□□□□ 0.63
RARA-209ENST00000579727 POTEB2H3BUK9 544 aa19■□□□□ 0.63
RARA-209ENST00000579727 CYTH3O43739 400 aa19■□□□□ 0.63
RARA-209ENST00000579727 GJB1P08034 283 aa19■□□□□ 0.63
RARA-209ENST00000579727 HMGB1P09429 215 aaKnown RBP19■□□□□ 0.63
RARA-209ENST00000579727 RPS6KB1P23443 525 aa19■□□□□ 0.63
RARA-209ENST00000579727 FGD1P98174 961 aa19■□□□□ 0.63
RARA-209ENST00000579727 CHRDL2Q6WN34 429 aa19■□□□□ 0.63
RARA-209ENST00000579727 SLC30A10Q6XR72 485 aa19■□□□□ 0.63
RARA-209ENST00000579727 Q6ZUG5 572 aa19■□□□□ 0.63
RARA-209ENST00000579727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19■□□□□ 0.63
RARA-209ENST00000579727 TMTC2Q8N394 836 aa19■□□□□ 0.63
RARA-209ENST00000579727 CLEC4DQ8WXI8 215 aa19■□□□□ 0.63
RARA-209ENST00000579727 FGD4Q96M96 766 aa19■□□□□ 0.63
RARA-209ENST00000579727 CYP39A1Q9NYL5 469 aa19■□□□□ 0.63
RARA-209ENST00000579727 NAP1L2Q9ULW6 460 aaPredicted RBP19■□□□□ 0.63
RARA-209ENST00000579727 DDX49Q9Y6V7 483 aaKnown RBP19■□□□□ 0.63
RARA-209ENST00000579727 KLF18A0A0U1RQI7 1052 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 PTPDC1A2A3K4 754 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 EPB41L2O43491 1005 aaKnown RBP18.99■□□□□ 0.63
RARA-209ENST00000579727 PPP1R11O60927 126 aaPredicted RBP18.99■□□□□ 0.63
RARA-209ENST00000579727 IGHA2P01877 340 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 GJA8P48165 433 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 APOA5Q6Q788 366 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 SGMS1Q86VZ5 419 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 FBXO11Q86XK2 927 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 TINF2Q9BSI4 451 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 LRRC37A2A6NM11 1700 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 COL6A3P12111 3177 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 PFASO15067 1338 aa18.99■□□□□ 0.63
RARA-209ENST00000579727 SGPL1O95470 568 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 CYBAP13498 195 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 CALML3P27482 149 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 PSMA5P28066 241 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 APOBRQ0VD83 1088 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 BAATQ14032 418 aaPredicted RBP18.98■□□□□ 0.63
RARA-209ENST00000579727 ANO1Q5XXA6 986 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 CCDC82Q8N4S0 544 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 BRF1Q92994 677 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 UPF3BQ9BZI7 483 aaKnown RBP18.98■□□□□ 0.63
RARA-209ENST00000579727 RBM27Q9P2N5 1060 aaKnown RBP18.98■□□□□ 0.63
RARA-209ENST00000579727 DIS3Q9Y2L1 958 aaKnown RBP18.98■□□□□ 0.63
RARA-209ENST00000579727 GTF3C3Q9Y5Q9 886 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 ASTN1O14525 1302 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 ABCB11O95342 1321 aa18.98■□□□□ 0.63
RARA-209ENST00000579727 SOWAHBA6NEL2 793 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 ZBTB5O15062 677 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 TFRCP02786 760 aaKnown RBP18.97■□□□□ 0.63
RARA-209ENST00000579727 CALM1P0DP23 149 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 CALM2P0DP24 149 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 CALM3P0DP25 149 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 KIF5BP33176 963 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 SYNE3Q6ZMZ3 975 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 SRBD1Q8N5C6 995 aaKnown RBP18.97■□□□□ 0.63
RARA-209ENST00000579727 FAM133AQ8N9E0 248 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 SLC17A8Q8NDX2 589 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 MTMR8Q96EF0 704 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 MAP3K14Q99558 947 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 RIOX1Q9H6W3 641 aa18.97■□□□□ 0.63
RARA-209ENST00000579727 hCG_1642624A0A1W2PR95 340 aa18.96■□□□□ 0.63
RARA-209ENST00000579727 ZBTB43O43298 467 aa18.96■□□□□ 0.63
RARA-209ENST00000579727 C8orf34Q49A92 452 aa18.96■□□□□ 0.63
RARA-209ENST00000579727 RNF207Q6ZRF8 634 aa18.96■□□□□ 0.63
RARA-209ENST00000579727 FANCBQ8NB91 859 aa18.96■□□□□ 0.63
RARA-209ENST00000579727 TBC1D5Q92609 795 aa18.96■□□□□ 0.63
RARA-209ENST00000579727 AMNQ9BXJ7 453 aa18.96■□□□□ 0.63
RARA-209ENST00000579727 GOLGA8AA7E2F4 631 aa18.95■□□□□ 0.62
RARA-209ENST00000579727 GOLGA8BA8MQT2 603 aa18.95■□□□□ 0.62
RARA-209ENST00000579727 RPS6P62753 249 aaKnown RBP18.95■□□□□ 0.62
RARA-209ENST00000579727 TMTC3Q6ZXV5 915 aa18.95■□□□□ 0.62
RARA-209ENST00000579727 RUFY3Q7L099 469 aa18.95■□□□□ 0.62
RARA-209ENST00000579727 ARMCX2Q7L311 632 aa18.95■□□□□ 0.62
RARA-209ENST00000579727 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
RARA-209ENST00000579727 ZHX1Q9UKY1 873 aaPredicted RBP18.95■□□□□ 0.62
RARA-209ENST00000579727 PNMA2Q9UL42 364 aa18.95■□□□□ 0.62
RARA-209ENST00000579727 PCDHA1Q9Y5I3 950 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms