RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 ZHX1Q9UKY1 873 aaPredicted RBP20.36■□□□□ 0.85
ITGB4-205ENST00000579211 SYNGAP1Q96PV0 1343 aa20.35■□□□□ 0.85
ITGB4-205ENST00000579211 FGD1P98174 961 aa20.35■□□□□ 0.85
ITGB4-205ENST00000579211 LHX8Q68G74 356 aa20.35■□□□□ 0.85
ITGB4-205ENST00000579211 SYNE3Q6ZMZ3 975 aa20.35■□□□□ 0.85
ITGB4-205ENST00000579211 RNF207Q6ZRF8 634 aa20.35■□□□□ 0.85
ITGB4-205ENST00000579211 FBXO11Q86XK2 927 aa20.35■□□□□ 0.85
ITGB4-205ENST00000579211 JMJD4Q9H9V9 463 aa20.35■□□□□ 0.85
ITGB4-205ENST00000579211 LY9Q9HBG7 655 aa20.35■□□□□ 0.85
ITGB4-205ENST00000579211 CYP39A1Q9NYL5 469 aa20.35■□□□□ 0.85
ITGB4-205ENST00000579211 ADD3Q9UEY8 706 aaKnown RBP20.35■□□□□ 0.85
ITGB4-205ENST00000579211 ABCB11O95342 1321 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 ALPK3Q96L96 1907 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 PALM3A6NDB9 673 aaPredicted RBP20.34■□□□□ 0.85
ITGB4-205ENST00000579211 ASB14A6NK59 587 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 IGHA2P01877 340 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 CALML3P27482 149 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 KIF5BP33176 963 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 BAATQ14032 418 aaPredicted RBP20.34■□□□□ 0.85
ITGB4-205ENST00000579211 QRICH1Q2TAL8 776 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 MAMDC4Q6UXC1 1216 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 ZNF654Q8IZM8 581 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 ARRDC4Q8NCT1 418 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 MPHOSPH6Q99547 160 aaKnown RBP20.34■□□□□ 0.85
ITGB4-205ENST00000579211 LRRC2Q9BYS8 371 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 C11orf49Q9H6J7 331 aa20.34■□□□□ 0.85
ITGB4-205ENST00000579211 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.34■□□□□ 0.85
ITGB4-205ENST00000579211 NFIBO00712 420 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 SH2B2O14492 632 aaPredicted RBP20.33■□□□□ 0.85
ITGB4-205ENST00000579211 HMGB1P09429 215 aaKnown RBP20.33■□□□□ 0.85
ITGB4-205ENST00000579211 RARBP10826 455 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 AKR1A1P14550 325 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 ARMCX2Q7L311 632 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 HOMER1Q86YM7 354 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 CCDC144CPQ8IYA2 1237 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 FAM133AQ8N9E0 248 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 DIS3LQ8TF46 1054 aaKnown RBP20.33■□□□□ 0.85
ITGB4-205ENST00000579211 ABHD16BQ9H3Z7 469 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 GPHNQ9NQX3 736 aaPredicted RBP20.33■□□□□ 0.85
ITGB4-205ENST00000579211 FAM184BQ9ULE4 1060 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 MRPL11Q9Y3B7 192 aaKnown RBP20.33■□□□□ 0.85
ITGB4-205ENST00000579211 SLC12A7Q9Y666 1083 aa20.33■□□□□ 0.85
ITGB4-205ENST00000579211 DDAH1O94760 285 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 CALM1P0DP23 149 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 CALM2P0DP24 149 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 CALM3P0DP25 149 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 LIFRP42702 1097 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 TROAPQ12815 778 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 TRAF1Q13077 416 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 ACVR2BQ13705 512 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 TSGA10IPQ3SY00 556 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 DHX32Q7L7V1 743 aaKnown RBP20.32■□□□□ 0.84
ITGB4-205ENST00000579211 MCF2L2Q86YR7 1114 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 RASEFQ8IZ41 740 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 MYL10Q9BUA6 226 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 AMNQ9BXJ7 453 aa20.32■□□□□ 0.84
ITGB4-205ENST00000579211 SOWAHBA6NEL2 793 aa20.31■□□□□ 0.84
ITGB4-205ENST00000579211 B4DLN1 442 aa20.31■□□□□ 0.84
ITGB4-205ENST00000579211 KBTBD13C9JR72 458 aa20.31■□□□□ 0.84
ITGB4-205ENST00000579211 SNAI1O95863 264 aaPredicted RBP20.31■□□□□ 0.84
ITGB4-205ENST00000579211 MRPL12P52815 198 aaKnown RBP20.31■□□□□ 0.84
ITGB4-205ENST00000579211 UBE2Q1Q7Z7E8 422 aa20.31■□□□□ 0.84
ITGB4-205ENST00000579211 MAP3K14Q99558 947 aa20.31■□□□□ 0.84
ITGB4-205ENST00000579211 ZBTB5O15062 677 aa20.3■□□□□ 0.84
ITGB4-205ENST00000579211 ZNF865P0CJ78 1059 aaPredicted RBP20.3■□□□□ 0.84
ITGB4-205ENST00000579211 HSPA4P34932 840 aa20.3■□□□□ 0.84
ITGB4-205ENST00000579211 GNAQP50148 359 aa20.3■□□□□ 0.84
ITGB4-205ENST00000579211 ADCK5Q3MIX3 580 aa20.3■□□□□ 0.84
ITGB4-205ENST00000579211 GJC2Q5T442 439 aaPredicted RBP20.3■□□□□ 0.84
ITGB4-205ENST00000579211 NOL8Q76FK4 1167 aaKnown RBP20.3■□□□□ 0.84
ITGB4-205ENST00000579211 CLEC4DQ8WXI8 215 aa20.3■□□□□ 0.84
ITGB4-205ENST00000579211 PIBF1Q8WXW3 757 aa20.3■□□□□ 0.84
ITGB4-205ENST00000579211 JAKMIP1Q96N16 626 aaKnown RBP20.3■□□□□ 0.84
ITGB4-205ENST00000579211 PIGSQ96S52 555 aa20.3■□□□□ 0.84
ITGB4-205ENST00000579211 XPNPEP3Q9NQH7 507 aa20.3■□□□□ 0.84
ITGB4-205ENST00000579211 NAP1L2Q9ULW6 460 aaPredicted RBP20.3■□□□□ 0.84
ITGB4-205ENST00000579211 CEP290O15078 2479 aa20.3■□□□□ 0.84
ITGB4-205ENST00000579211 MKI67P46013 3256 aaKnown RBP20.29■□□□□ 0.84
ITGB4-205ENST00000579211 KIAA1217Q5T5P2 1943 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 EVI5O60447 810 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 RPS6P62753 249 aaKnown RBP20.29■□□□□ 0.84
ITGB4-205ENST00000579211 BLOC1S2Q6QNY1 142 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 SLC30A10Q6XR72 485 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 RNF180Q86T96 592 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 FGD4Q96M96 766 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 TCEANC2Q96MN5 208 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 PURBQ96QR8 312 aaKnown RBP20.29■□□□□ 0.84
ITGB4-205ENST00000579211 LZTS2Q9BRK4 669 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 SENP6Q9GZR1 1112 aaPredicted RBP20.29■□□□□ 0.84
ITGB4-205ENST00000579211 PCDHA1Q9Y5I3 950 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 NR2E3Q9Y5X4 410 aa20.29■□□□□ 0.84
ITGB4-205ENST00000579211 LRRC37A2A6NM11 1700 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 MYH7BA7E2Y1 1941 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 DNM1LO00429 736 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 RXRAP19793 462 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 PSMA5P28066 241 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 ALDH5A1P51649 535 aaPredicted RBP20.28■□□□□ 0.84
ITGB4-205ENST00000579211 CCDC144BQ3MJ40 725 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 PRPF38BQ5VTL8 546 aaKnown RBP20.28■□□□□ 0.84
ITGB4-205ENST00000579211 EEPD1Q7L9B9 569 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms