RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 KLHDC9Q8NEP7 349 aa20.6■□□□□ 0.89
SLC9A3R1-203ENST00000578958 FGD4Q96M96 766 aa20.6■□□□□ 0.89
SLC9A3R1-203ENST00000578958 TMEM39AQ9NV64 488 aa20.6■□□□□ 0.89
SLC9A3R1-203ENST00000578958 CYP39A1Q9NYL5 469 aa20.6■□□□□ 0.89
SLC9A3R1-203ENST00000578958 CTNNA3Q9UI47 895 aa20.6■□□□□ 0.89
SLC9A3R1-203ENST00000578958 LAMA3Q16787 3333 aa20.6■□□□□ 0.89
SLC9A3R1-203ENST00000578958 TRIM43BA6NCK2 446 aa20.59■□□□□ 0.89
SLC9A3R1-203ENST00000578958 SOWAHBA6NEL2 793 aa20.59■□□□□ 0.89
SLC9A3R1-203ENST00000578958 PDHBP11177 359 aa20.59■□□□□ 0.89
SLC9A3R1-203ENST00000578958 NT5C2P49902 561 aa20.59■□□□□ 0.89
SLC9A3R1-203ENST00000578958 SH3RF1Q7Z6J0 888 aa20.59■□□□□ 0.89
SLC9A3R1-203ENST00000578958 TRIM43Q96BQ3 446 aaPredicted RBP20.59■□□□□ 0.89
SLC9A3R1-203ENST00000578958 ZKSCAN3Q9BRR0 538 aa20.59■□□□□ 0.89
SLC9A3R1-203ENST00000578958 PTPDC1A2A3K4 754 aa20.58■□□□□ 0.89
SLC9A3R1-203ENST00000578958 ASGR1P07306 291 aa20.58■□□□□ 0.89
SLC9A3R1-203ENST00000578958 CST5P28325 142 aaPredicted RBP20.58■□□□□ 0.89
SLC9A3R1-203ENST00000578958 GJA9P57773 515 aa20.58■□□□□ 0.89
SLC9A3R1-203ENST00000578958 AP5M1Q9H0R1 490 aa20.58■□□□□ 0.89
SLC9A3R1-203ENST00000578958 ADD3Q9UEY8 706 aaKnown RBP20.58■□□□□ 0.89
SLC9A3R1-203ENST00000578958 ELP1O95163 1332 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 NEDD4P46934 1319 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 MROH7Q68CQ1 1323 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 MYADML2A6NDP7 307 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 KDM4AO75164 1064 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 ZNF543Q08ER8 600 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 GPATCH4Q5T3I0 446 aaKnown RBP20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 Q7L0L9 218 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 EEPD1Q7L9B9 569 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 DGKHQ86XP1 1220 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 MPHOSPH6Q99547 160 aaKnown RBP20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 DSCC1Q9BVC3 393 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 KAT14Q9H8E8 782 aa20.57■□□□□ 0.88
SLC9A3R1-203ENST00000578958 ZEB2O60315 1214 aa20.56■□□□□ 0.88
SLC9A3R1-203ENST00000578958 BAATQ14032 418 aaPredicted RBP20.56■□□□□ 0.88
SLC9A3R1-203ENST00000578958 TOX2Q96NM4 488 aa20.56■□□□□ 0.88
SLC9A3R1-203ENST00000578958 UPF3AQ9H1J1 476 aaKnown RBP20.56■□□□□ 0.88
SLC9A3R1-203ENST00000578958 A0A0U1RQG5 324 aaPredicted RBP20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 KIAA0355O15063 1070 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 ADCY6O43306 1168 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 CALML3P27482 149 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 IRX5P78411 483 aaPredicted RBP20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 SHHQ15465 462 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 IQSEC1Q6DN90 963 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 CCSAPQ6IQ19 270 aaPredicted RBP20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 KIAA1211Q6ZU35 1233 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 ANKRD33Q7Z3H0 272 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 TLK2Q86UE8 772 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 FBXO16Q8IX29 292 aaPredicted RBP20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 KRT23Q9C075 422 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 KATNBL1Q9H079 304 aa20.55■□□□□ 0.88
SLC9A3R1-203ENST00000578958 MCM3APO60318 1980 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 B4E1Z4 1266 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 NFIBO00712 420 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 TLR3O15455 904 aaKnown RBP20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 DYNC1LI2O43237 492 aaPredicted RBP20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 GOLGA8HP0CJ92 632 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 BEX3Q00994 111 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 FAAP100Q0VG06 881 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 RNF207Q6ZRF8 634 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 PNMA1Q8ND90 353 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 ZSCAN10Q96SZ4 725 aaPredicted RBP20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 UBAC1Q9BSL1 405 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 CNNM2Q9H8M5 875 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 VTA1Q9NP79 307 aa20.54■□□□□ 0.88
SLC9A3R1-203ENST00000578958 B4DLN1 442 aa20.53■□□□□ 0.88
SLC9A3R1-203ENST00000578958 ARVCFO00192 962 aa20.53■□□□□ 0.88
SLC9A3R1-203ENST00000578958 DHX16O60231 1041 aaKnown RBP20.53■□□□□ 0.88
SLC9A3R1-203ENST00000578958 SNHG28P0DPA3 235 aa20.53■□□□□ 0.88
SLC9A3R1-203ENST00000578958 MRPL12P52815 198 aaKnown RBP20.53■□□□□ 0.88
SLC9A3R1-203ENST00000578958 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
SLC9A3R1-203ENST00000578958 FPGSQ05932 587 aa20.53■□□□□ 0.88
SLC9A3R1-203ENST00000578958 RUFY2Q8WXA3 655 aa20.53■□□□□ 0.88
SLC9A3R1-203ENST00000578958 PURBQ96QR8 312 aaKnown RBP20.53■□□□□ 0.88
SLC9A3R1-203ENST00000578958 CABYRO75952 493 aa20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 SMPD1P17405 629 aa20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 ALDH5A1P51649 535 aaPredicted RBP20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 FSCN1Q16658 493 aaKnown RBP20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 USH1GQ495M9 461 aa20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 C9orf50Q5SZB4 431 aa20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 TTC22Q5TAA0 569 aa20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 SLC17A8Q8NDX2 589 aa20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 UBA5Q9GZZ9 404 aa20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 PDGFCQ9NRA1 345 aa20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 DDX49Q9Y6V7 483 aaKnown RBP20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 LTBP2Q14767 1821 aa20.52■□□□□ 0.88
SLC9A3R1-203ENST00000578958 WDR19Q8NEZ3 1342 aa20.52■□□□□ 0.87
SLC9A3R1-203ENST00000578958 LOC102724159A0A0B4J2E5 919 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ITGB8P26012 769 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 PDE4DQ08499 809 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 TRDNQ13061 729 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 PWP2Q15269 919 aaKnown RBP20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ZNF697Q5TEC3 545 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 TAPT1Q6NXT6 567 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 CXCL17Q6UXB2 119 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 RNPC3Q96LT9 517 aaKnown RBP20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 MTMR10Q9NXD2 777 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ZSWIM5Q9P217 1185 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 GNEQ9Y223 722 aaKnown RBP20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ASTN1O14525 1302 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms