RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 FBXO22Q8NEZ5 403 aa10.7□□□□□ -0.7
SNX11-205ENST00000578861 EAF2Q96CJ1 260 aaPredicted RBP10.7□□□□□ -0.7
SNX11-205ENST00000578861 PABPC5Q96DU9 382 aaKnown RBP10.7□□□□□ -0.7
SNX11-205ENST00000578861 ZNF512BQ96KM6 892 aaPredicted RBP10.7□□□□□ -0.7
SNX11-205ENST00000578861 BCL11AQ9H165 835 aa10.7□□□□□ -0.7
SNX11-205ENST00000578861 CABP5Q9NP86 173 aa10.7□□□□□ -0.7
SNX11-205ENST00000578861 TECTAO75443 2155 aa10.7□□□□□ -0.7
SNX11-205ENST00000578861 KMT2BQ9UMN6 2715 aaPredicted RBP10.69□□□□□ -0.7
SNX11-205ENST00000578861 ZNFX1Q9P2E3 1918 aaKnown RBP10.69□□□□□ -0.7
SNX11-205ENST00000578861 CABYRO75952 493 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 RLBP1P12271 317 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 DSG3P32926 999 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 SLC4A3P48751 1232 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 ERVK-21P61565 698 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 PTPROQ16827 1216 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 CERKLQ49MI3 558 aaPredicted RBP10.69□□□□□ -0.7
SNX11-205ENST00000578861 TCEAL5Q5H9L2 206 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 SLC43A3Q8NBI5 491 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 RETREG2Q8NC44 543 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 BANK1Q8NDB2 785 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 MRPL38Q96DV4 380 aaKnown RBP10.69□□□□□ -0.7
SNX11-205ENST00000578861 DDX11Q96FC9 970 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 UPF3AQ9H1J1 476 aaKnown RBP10.69□□□□□ -0.7
SNX11-205ENST00000578861 ANTXR1Q9H6X2 564 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 TRMT13Q9NUP7 481 aaKnown RBP10.69□□□□□ -0.7
SNX11-205ENST00000578861 CTNNA3Q9UI47 895 aa10.69□□□□□ -0.7
SNX11-205ENST00000578861 NOP58Q9Y2X3 529 aaKnown RBP10.69□□□□□ -0.7
SNX11-205ENST00000578861 BAZ2AQ9UIF9 1905 aaKnown RBP10.68□□□□□ -0.7
SNX11-205ENST00000578861 GRIN2DO15399 1336 aa10.68□□□□□ -0.7
SNX11-205ENST00000578861 NBL1P41271 181 aa10.68□□□□□ -0.7
SNX11-205ENST00000578861 TMEM132BQ14DG7 1078 aa10.68□□□□□ -0.7
SNX11-205ENST00000578861 SMAD2Q15796 467 aaKnown RBP10.68□□□□□ -0.7
SNX11-205ENST00000578861 TATDN1Q6P1N9 297 aa10.68□□□□□ -0.7
SNX11-205ENST00000578861 AACSQ86V21 672 aa10.68□□□□□ -0.7
SNX11-205ENST00000578861 SPICE1Q8N0Z3 855 aa10.68□□□□□ -0.7
SNX11-205ENST00000578861 KCNG4Q8TDN1 519 aa10.68□□□□□ -0.7
SNX11-205ENST00000578861 SERPINB13Q9UIV8 391 aa10.68□□□□□ -0.7
SNX11-205ENST00000578861 EXOC6BQ9Y2D4 811 aa10.68□□□□□ -0.7
SNX11-205ENST00000578861 LINC01553A4QN01 128 aa10.67□□□□□ -0.7
SNX11-205ENST00000578861 MPHOSPH10O00566 681 aaKnown RBP10.67□□□□□ -0.7
SNX11-205ENST00000578861 GALR2O43603 387 aaPredicted RBP10.67□□□□□ -0.7
SNX11-205ENST00000578861 SUPT20HL2P0C7V6 817 aa10.67□□□□□ -0.7
SNX11-205ENST00000578861 HNRNPUQ00839 825 aaKnown RBP eCLIP10.67□□□□□ -0.7
SNX11-205ENST00000578861 TIGD5Q53EQ6 642 aa10.67□□□□□ -0.7
SNX11-205ENST00000578861 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
SNX11-205ENST00000578861 KIAA2013Q8IYS2 634 aa10.67□□□□□ -0.7
SNX11-205ENST00000578861 RAD9AQ99638 391 aa10.67□□□□□ -0.7
SNX11-205ENST00000578861 C17orf80Q9BSJ5 609 aa10.67□□□□□ -0.7
SNX11-205ENST00000578861 AP5M1Q9H0R1 490 aa10.67□□□□□ -0.7
SNX11-205ENST00000578861 ALDH8A1Q9H2A2 487 aaPredicted RBP10.67□□□□□ -0.7
SNX11-205ENST00000578861 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.67□□□□□ -0.7
SNX11-205ENST00000578861 ACACBO00763 2458 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 MAGEB6P1A0A0J9YX57 407 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 CTAGE5O15320 804 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 DYNC1LI2O43237 492 aaPredicted RBP10.66□□□□□ -0.7
SNX11-205ENST00000578861 MBTPS2O43462 519 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 ZEB2O60315 1214 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 POLR3DP05423 398 aaPredicted RBP10.66□□□□□ -0.7
SNX11-205ENST00000578861 RFC2P35250 354 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 STAT3P40763 770 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 PLCD1P51178 756 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 WDR5P61964 334 aaKnown RBP10.66□□□□□ -0.7
SNX11-205ENST00000578861 EVX2Q03828 476 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 SIGLEC14Q08ET2 396 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 PUM1Q14671 1186 aaKnown RBP eCLIP10.66□□□□□ -0.7
SNX11-205ENST00000578861 SEPT2Q15019 361 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 FSCN1Q16658 493 aaKnown RBP10.66□□□□□ -0.7
SNX11-205ENST00000578861 CEP85Q6P2H3 762 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 RPAINQ86UA6 219 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 MSL3Q8N5Y2 521 aaKnown RBP10.66□□□□□ -0.7
SNX11-205ENST00000578861 EHD4Q9H223 541 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 IL1RAPL2Q9NP60 686 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 GVINP1Q7Z2Y8 2422 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 MYH7P12883 1935 aa10.66□□□□□ -0.7
SNX11-205ENST00000578861 COL11A1P12107 1806 aaPredicted RBP10.65□□□□□ -0.7
SNX11-205ENST00000578861 TNKSO95271 1327 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 A0A1W2PRG0 241 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 IGSF3O75054 1194 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 BAIAP3O94812 1187 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 IQCF3P0C7M6 154 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 PTGS1P23219 599 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 SHMT1P34896 483 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 DEFB103AP81534 67 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 TNFAIP2Q03169 654 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 ACAP1Q15027 740 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 FAM47CQ5HY64 1035 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 KIAA1755Q5JYT7 1200 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 CERS3Q8IU89 383 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 ERC1Q8IUD2 1116 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 RIOX2Q8IUF8 465 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 PANK1Q8TE04 598 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 CHAMP1Q96JM3 812 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 SEZ6LQ9BYH1 1024 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 ABHD16BQ9H3Z7 469 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 NSUN3Q9H649 340 aaKnown RBP10.65□□□□□ -0.7
SNX11-205ENST00000578861 MCM9Q9NXL9 1143 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 CHD6Q8TD26 2715 aa10.65□□□□□ -0.7
SNX11-205ENST00000578861 ZNF236Q9UL36 1845 aa10.65□□□□□ -0.71
SNX11-205ENST00000578861 ZFHX4Q86UP3 3567 aa10.65□□□□□ -0.71
SNX11-205ENST00000578861 PARP14Q460N5 1801 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms