RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 MCM3APO60318 1980 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 KLRF2D3W0D1 207 aa16.85■□□□□ 0.29
MKS1-207ENST00000578789 MSCO60682 206 aa16.85■□□□□ 0.29
MKS1-207ENST00000578789 LHX8Q68G74 356 aa16.85■□□□□ 0.29
MKS1-207ENST00000578789 TMTC2Q8N394 836 aa16.85■□□□□ 0.29
MKS1-207ENST00000578789 ANKLE1Q8NAG6 615 aa16.85■□□□□ 0.29
MKS1-207ENST00000578789 CLEC4DQ8WXI8 215 aa16.85■□□□□ 0.29
MKS1-207ENST00000578789 JMJD4Q9H9V9 463 aa16.85■□□□□ 0.29
MKS1-207ENST00000578789 CYP39A1Q9NYL5 469 aa16.85■□□□□ 0.29
MKS1-207ENST00000578789 POTEB2H3BUK9 544 aa16.84■□□□□ 0.29
MKS1-207ENST00000578789 NFIBO00712 420 aa16.84■□□□□ 0.29
MKS1-207ENST00000578789 FARP2O94887 1054 aaPredicted RBP16.84■□□□□ 0.29
MKS1-207ENST00000578789 TFRCP02786 760 aaKnown RBP16.84■□□□□ 0.29
MKS1-207ENST00000578789 EXOSC10Q01780 885 aaKnown RBP16.84■□□□□ 0.29
MKS1-207ENST00000578789 SLC35G1Q2M3R5 365 aa16.84■□□□□ 0.29
MKS1-207ENST00000578789 QRICH1Q2TAL8 776 aa16.84■□□□□ 0.29
MKS1-207ENST00000578789 DHX32Q7L7V1 743 aaKnown RBP16.84■□□□□ 0.29
MKS1-207ENST00000578789 SGMS1Q86VZ5 419 aa16.84■□□□□ 0.29
MKS1-207ENST00000578789 MAF1Q9H063 256 aa16.84■□□□□ 0.29
MKS1-207ENST00000578789 DDX20Q9UHI6 824 aaKnown RBP16.84■□□□□ 0.29
MKS1-207ENST00000578789 TNRC18O15417 2968 aaPredicted RBP16.83■□□□□ 0.29
MKS1-207ENST00000578789 SEPT4O43236 478 aa16.83■□□□□ 0.28
MKS1-207ENST00000578789 ABCB11O95342 1321 aa16.83■□□□□ 0.28
MKS1-207ENST00000578789 HMGB1P09429 215 aaKnown RBP16.83■□□□□ 0.28
MKS1-207ENST00000578789 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
MKS1-207ENST00000578789 LRRC2Q9BYS8 371 aa16.83■□□□□ 0.28
MKS1-207ENST00000578789 RIOX1Q9H6W3 641 aa16.83■□□□□ 0.28
MKS1-207ENST00000578789 SNX14Q9Y5W7 946 aa16.83■□□□□ 0.28
MKS1-207ENST00000578789 ASTN1O14525 1302 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 SOWAHBA6NEL2 793 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 CCDC69A6NI79 296 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 DHX16O60231 1041 aaKnown RBP16.82■□□□□ 0.28
MKS1-207ENST00000578789 SNAI1O95863 264 aaPredicted RBP16.82■□□□□ 0.28
MKS1-207ENST00000578789 ZNF865P0CJ78 1059 aaPredicted RBP16.82■□□□□ 0.28
MKS1-207ENST00000578789 CALM1P0DP23 149 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 CALM2P0DP24 149 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 CALM3P0DP25 149 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 MNX1P50219 401 aaPredicted RBP16.82■□□□□ 0.28
MKS1-207ENST00000578789 NSMFQ6X4W1 530 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 NFXL1Q6ZNB6 911 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 CTCFLQ8NI51 663 aaPredicted RBP16.82■□□□□ 0.28
MKS1-207ENST00000578789 NUP133Q8WUM0 1156 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 MYL10Q9BUA6 226 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 CNPY2Q9Y2B0 182 aa16.82■□□□□ 0.28
MKS1-207ENST00000578789 ZBTB5O15062 677 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 CYTH3O43739 400 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 CNGA1P29973 690 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 KIF5BP33176 963 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 BAATQ14032 418 aaPredicted RBP16.81■□□□□ 0.28
MKS1-207ENST00000578789 USH1GQ495M9 461 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 PRAMEF19Q5SWL8 479 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 SLC30A10Q6XR72 485 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 ARMCX2Q7L311 632 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 FBXO11Q86XK2 927 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 RGS22Q8NE09 1264 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 USP26Q9BXU7 913 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 VAT1LQ9HCJ6 419 aa16.81■□□□□ 0.28
MKS1-207ENST00000578789 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.81■□□□□ 0.28
MKS1-207ENST00000578789 PDE4DIPQ5VU43 2346 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 BAZ2BQ9UIF8 2168 aaKnown RBP16.8■□□□□ 0.28
MKS1-207ENST00000578789 LOC102724159A0A0B4J2E5 919 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 ASB14A6NK59 587 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 PPP1R11O60927 126 aaPredicted RBP16.8■□□□□ 0.28
MKS1-207ENST00000578789 SMARCA1P28370 1054 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 PWP2Q15269 919 aaKnown RBP16.8■□□□□ 0.28
MKS1-207ENST00000578789 RNF207Q6ZRF8 634 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 MORC4Q8TE76 937 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 DIS3LQ8TF46 1054 aaKnown RBP16.8■□□□□ 0.28
MKS1-207ENST00000578789 TCEANC2Q96MN5 208 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 JAKMIP1Q96N16 626 aaKnown RBP16.8■□□□□ 0.28
MKS1-207ENST00000578789 SPZ1Q9BXG8 430 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 AMNQ9BXJ7 453 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 KATNBL1Q9H079 304 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 SLC12A7Q9Y666 1083 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 ALPK3Q96L96 1907 aa16.8■□□□□ 0.28
MKS1-207ENST00000578789 PTPDC1A2A3K4 754 aa16.79■□□□□ 0.28
MKS1-207ENST00000578789 AKR1A1P14550 325 aa16.79■□□□□ 0.28
MKS1-207ENST00000578789 GNAQP50148 359 aa16.79■□□□□ 0.28
MKS1-207ENST00000578789 RPS6P62753 249 aaKnown RBP16.79■□□□□ 0.28
MKS1-207ENST00000578789 GHRHRQ02643 423 aa16.79■□□□□ 0.28
MKS1-207ENST00000578789 APOA5Q6Q788 366 aa16.79■□□□□ 0.28
MKS1-207ENST00000578789 PIGSQ96S52 555 aa16.79■□□□□ 0.28
MKS1-207ENST00000578789 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
MKS1-207ENST00000578789 ABHD16BQ9H3Z7 469 aa16.79■□□□□ 0.28
MKS1-207ENST00000578789 MRPL11Q9Y3B7 192 aaKnown RBP16.79■□□□□ 0.28
MKS1-207ENST00000578789 ALDH5A1P51649 535 aaPredicted RBP16.78■□□□□ 0.28
MKS1-207ENST00000578789 RCAN1P53805 252 aa16.78■□□□□ 0.28
MKS1-207ENST00000578789 TRAF1Q13077 416 aa16.78■□□□□ 0.28
MKS1-207ENST00000578789 ACVR2BQ13705 512 aa16.78■□□□□ 0.28
MKS1-207ENST00000578789 BLOC1S2Q6QNY1 142 aa16.78■□□□□ 0.28
MKS1-207ENST00000578789 NECAB2Q7Z6G3 386 aa16.78■□□□□ 0.28
MKS1-207ENST00000578789 MCF2L2Q86YR7 1114 aa16.78■□□□□ 0.28
MKS1-207ENST00000578789 FBXL16Q8N461 479 aa16.78■□□□□ 0.28
MKS1-207ENST00000578789 PAWRQ96IZ0 340 aaKnown RBP16.78■□□□□ 0.28
MKS1-207ENST00000578789 PURBQ96QR8 312 aaKnown RBP16.78■□□□□ 0.28
MKS1-207ENST00000578789 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
MKS1-207ENST00000578789 ZHX1Q9UKY1 873 aaPredicted RBP16.78■□□□□ 0.28
MKS1-207ENST00000578789 PNMA6FA0A0J9YX94 578 aa16.77■□□□□ 0.28
MKS1-207ENST00000578789 OPLAHO14841 1288 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms