RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 HOXC10Q9NYD6 342 aa7.58□□□□□ -1.2
UBB-208ENST00000578706 ZHX1Q9UKY1 873 aaPredicted RBP7.58□□□□□ -1.2
UBB-208ENST00000578706 NOB1Q9ULX3 412 aaKnown RBP7.58□□□□□ -1.2
UBB-208ENST00000578706 PA2G4Q9UQ80 394 aaKnown RBP7.58□□□□□ -1.2
UBB-208ENST00000578706 TRPC6Q9Y210 931 aa7.58□□□□□ -1.2
UBB-208ENST00000578706 FASNP49327 2511 aaKnown RBP7.58□□□□□ -1.2
UBB-208ENST00000578706 SETXQ7Z333 2677 aaKnown RBP7.58□□□□□ -1.2
UBB-208ENST00000578706 CYP2C9P11712 490 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 SHMT1P34896 483 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 LTBRP36941 435 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 PPP4CP60510 307 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 ERVK-21P61565 698 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 PSMC6P62333 389 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 TFCP2Q12800 502 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 ITGA7Q13683 1181 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 CCDC144BQ3MJ40 725 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 NAA16Q6N069 864 aaPredicted RBP7.57□□□□□ -1.2
UBB-208ENST00000578706 MB21D1Q8N884 522 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 ADAMTS5Q9UNA0 930 aa7.57□□□□□ -1.2
UBB-208ENST00000578706 TRIP12Q14669 1992 aaPredicted RBP7.57□□□□□ -1.2
UBB-208ENST00000578706 NAV1Q8NEY1 1877 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 DNAJC25-GNG10A0A024R161 153 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 LINC01553A4QN01 128 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 IGHDP01880 384 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 UQCRFS1P1P0C7P4 283 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 NBL1P41271 181 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 EVX2Q03828 476 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 ACVR2BQ13705 512 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 KCTD2Q14681 263 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 SEPT2Q15019 361 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 SMAD2Q15796 467 aaKnown RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 ABCB5Q2M3G0 1257 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 RIOX2Q8IUF8 465 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 SUGP1Q8IWZ8 645 aaKnown RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 MSL3Q8N5Y2 521 aaKnown RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 REPS2Q8NFH8 660 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 RMDN1Q96DB5 314 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 PABPC5Q96DU9 382 aaKnown RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 UPF3BQ9BZI7 483 aaKnown RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 API5Q9BZZ5 524 aaKnown RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 CABP5Q9NP86 173 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 TRMT13Q9NUP7 481 aaKnown RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 ZNF214Q9UL59 606 aaPredicted RBP7.56□□□□□ -1.2
UBB-208ENST00000578706 TNNQ9UQP3 1299 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 PCDHB15Q9Y5E8 787 aa7.56□□□□□ -1.2
UBB-208ENST00000578706 NLRC5Q86WI3 1866 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 SCN10AQ9Y5Y9 1956 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 FLOT1O75955 427 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 SLC25A27O95847 323 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 AVPR2P30518 371 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 WDR5P61964 334 aaKnown RBP7.55□□□□□ -1.2
UBB-208ENST00000578706 DEFB103AP81534 67 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 DLX2Q07687 328 aaPredicted RBP7.55□□□□□ -1.2
UBB-208ENST00000578706 HDAC1Q13547 482 aaPredicted RBP7.55□□□□□ -1.2
UBB-208ENST00000578706 GPNMBQ14956 572 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 PKN1Q16512 942 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 TCTN1Q2MV58 587 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 CERKLQ49MI3 558 aaPredicted RBP7.55□□□□□ -1.2
UBB-208ENST00000578706 TMEM63BQ5T3F8 832 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 CLEC10AQ8IUN9 316 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 SIAH1Q8IUQ4 282 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 ITPRIPQ8IWB1 547 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 ASIC4Q96FT7 647 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 C17orf80Q9BSJ5 609 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 EHD4Q9H223 541 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 ALDH8A1Q9H2A2 487 aaPredicted RBP7.55□□□□□ -1.2
UBB-208ENST00000578706 FBXO28Q9NVF7 368 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 SERPINB13Q9UIV8 391 aa7.55□□□□□ -1.2
UBB-208ENST00000578706 FAM208BQ5VWN6 2430 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 KIF28PB7ZC32 967 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 SRGAP3O43295 1099 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 MBTPS2O43462 519 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 IGSF3O75054 1194 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 IQCF3P0C7M6 154 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 ACTN1P12814 892 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 ARID4AP29374 1257 aaPredicted RBP7.54□□□□□ -1.2
UBB-208ENST00000578706 MCAMP43121 646 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 USP5P45974 858 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 DYNLL1P63167 89 aaKnown RBP7.54□□□□□ -1.2
UBB-208ENST00000578706 ZXDAP98168 799 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 CLUL1Q15846 466 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 TCEAL5Q5H9L2 206 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 TTC6Q86TZ1 520 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 SPICE1Q8N0Z3 855 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 TMEM57Q8N5G2 664 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 MRPL38Q96DV4 380 aaKnown RBP7.54□□□□□ -1.2
UBB-208ENST00000578706 IPO9Q96P70 1041 aaKnown RBP7.54□□□□□ -1.2
UBB-208ENST00000578706 TGS1Q96RS0 853 aaKnown RBP7.54□□□□□ -1.2
UBB-208ENST00000578706 SNRKQ9NRH2 765 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 ZBTB40Q9NUA8 1239 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 RALYQ9UKM9 306 aaKnown RBP7.54□□□□□ -1.2
UBB-208ENST00000578706 GNEQ9Y223 722 aaKnown RBP7.54□□□□□ -1.2
UBB-208ENST00000578706 RIPK3Q9Y572 518 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 LCTP09848 1927 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 MYH8P13535 1937 aa7.54□□□□□ -1.2
UBB-208ENST00000578706 TNKSO95271 1327 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 MICAL3Q7RTP6 2002 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 CABYRO75952 493 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms