RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 SOX10P56693 466 aa25.23■■□□□ 1.63
CDC42EP4-203ENST00000578516 NSMFQ6X4W1 530 aa25.23■■□□□ 1.63
CDC42EP4-203ENST00000578516 SLC30A10Q6XR72 485 aa25.23■■□□□ 1.63
CDC42EP4-203ENST00000578516 TMTC3Q6ZXV5 915 aa25.23■■□□□ 1.63
CDC42EP4-203ENST00000578516 FANCBQ8NB91 859 aa25.23■■□□□ 1.63
CDC42EP4-203ENST00000578516 CHST13Q8NET6 341 aa25.23■■□□□ 1.63
CDC42EP4-203ENST00000578516 PDRG1Q9NUG6 133 aa25.23■■□□□ 1.63
CDC42EP4-203ENST00000578516 CNTNAP5Q8WYK1 1306 aa25.22■■□□□ 1.63
CDC42EP4-203ENST00000578516 ANAPC15P60006 121 aa25.22■■□□□ 1.63
CDC42EP4-203ENST00000578516 CNTN2Q02246 1040 aa25.22■■□□□ 1.63
CDC42EP4-203ENST00000578516 RTN1Q16799 776 aa25.22■■□□□ 1.63
CDC42EP4-203ENST00000578516 NOL8Q76FK4 1167 aaKnown RBP25.22■■□□□ 1.63
CDC42EP4-203ENST00000578516 MAP3K14Q99558 947 aa25.22■■□□□ 1.63
CDC42EP4-203ENST00000578516 UNC93B1Q9H1C4 597 aa25.22■■□□□ 1.63
CDC42EP4-203ENST00000578516 KIAA0100Q14667 2235 aaKnown RBP25.22■■□□□ 1.63
CDC42EP4-203ENST00000578516 ASTN1O14525 1302 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 DNAJC25-GNG10A0A024R161 153 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 STRNO43815 780 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 DTNBO60941 627 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 PPFIA3O75145 1194 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 HMGCRP04035 888 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 HOXC6P09630 235 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 KIF5BP33176 963 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 CYP2C19P33261 490 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 ZNF792Q3KQV3 632 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 SYNE3Q6ZMZ3 975 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 FBXO11Q86XK2 927 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 ABRAQ8N0Z2 381 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 ANKRD35Q8N283 1001 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 PXYLP1Q8TE99 480 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 TBC1D5Q92609 795 aa25.21■■□□□ 1.63
CDC42EP4-203ENST00000578516 CALM1P0DP23 149 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 CALM2P0DP24 149 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 CALM3P0DP25 149 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 XRCC5P13010 732 aaKnown RBP25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 TKFCQ3LXA3 575 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 IL17RAQ96F46 866 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 DDX11Q96FC9 970 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 MAML3Q96JK9 1138 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 KIF2CQ99661 725 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 SPZ1Q9BXG8 430 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 NCOA5Q9HCD5 579 aaKnown RBP25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 FBXO40Q9UH90 709 aa25.2■■□□□ 1.62
CDC42EP4-203ENST00000578516 POTEFA5A3E0 1075 aa25.19■■□□□ 1.62
CDC42EP4-203ENST00000578516 ZBTB5O15062 677 aa25.19■■□□□ 1.62
CDC42EP4-203ENST00000578516 PRKAR2AP13861 404 aaKnown RBP25.19■■□□□ 1.62
CDC42EP4-203ENST00000578516 CCT2P78371 535 aaKnown RBP25.19■■□□□ 1.62
CDC42EP4-203ENST00000578516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.19■■□□□ 1.62
CDC42EP4-203ENST00000578516 OPLAHO14841 1288 aa25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 CCL5P13501 91 aa25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 ADD1P35611 737 aaKnown RBP25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 METAP2P50579 478 aaKnown RBP eCLIP25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 CACNB2Q08289 660 aaPredicted RBP25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 FUT2Q10981 343 aa25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 STK3Q13188 491 aa25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 BAATQ14032 418 aaPredicted RBP25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 PRAMEF19Q5SWL8 479 aa25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 TRPV1Q8NER1 839 aa25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 C22orf23Q9BZE7 217 aa25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 CYP39A1Q9NYL5 469 aa25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 NID2Q14112 1375 aa25.18■■□□□ 1.62
CDC42EP4-203ENST00000578516 SOWAHBA6NEL2 793 aa25.17■■□□□ 1.62
CDC42EP4-203ENST00000578516 LARGE1O95461 756 aa25.17■■□□□ 1.62
CDC42EP4-203ENST00000578516 IGHA2P01877 340 aa25.17■■□□□ 1.62
CDC42EP4-203ENST00000578516 PDIA3P30101 505 aaKnown RBP25.17■■□□□ 1.62
CDC42EP4-203ENST00000578516 CCND3P30281 292 aaPredicted RBP25.17■■□□□ 1.62
CDC42EP4-203ENST00000578516 AK2P54819 239 aa25.17■■□□□ 1.62
CDC42EP4-203ENST00000578516 FBXL16Q8N461 479 aa25.17■■□□□ 1.62
CDC42EP4-203ENST00000578516 FAM133AQ8N9E0 248 aa25.17■■□□□ 1.62
CDC42EP4-203ENST00000578516 ABCB11O95342 1321 aa25.16■■□□□ 1.62
CDC42EP4-203ENST00000578516 PTPDC1A2A3K4 754 aa25.16■■□□□ 1.62
CDC42EP4-203ENST00000578516 CALML3P27482 149 aa25.16■■□□□ 1.62
CDC42EP4-203ENST00000578516 GPKOWQ92917 476 aaPredicted RBP eCLIP25.16■■□□□ 1.62
CDC42EP4-203ENST00000578516 AMNQ9BXJ7 453 aa25.16■■□□□ 1.62
CDC42EP4-203ENST00000578516 PNMA6FA0A0J9YX94 578 aa25.15■■□□□ 1.62
CDC42EP4-203ENST00000578516 POTEB2H3BUK9 544 aa25.15■■□□□ 1.62
CDC42EP4-203ENST00000578516 GNAQP50148 359 aa25.15■■□□□ 1.62
CDC42EP4-203ENST00000578516 UBXN2AP68543 259 aa25.15■■□□□ 1.62
CDC42EP4-203ENST00000578516 MAP3K21Q5TCX8 1036 aa25.15■■□□□ 1.62
CDC42EP4-203ENST00000578516 RRP36Q96EU6 259 aaKnown RBP25.15■■□□□ 1.62
CDC42EP4-203ENST00000578516 COL20A1Q9P218 1284 aa25.15■■□□□ 1.62
CDC42EP4-203ENST00000578516 TPCN1Q9ULQ1 816 aa25.15■■□□□ 1.62
CDC42EP4-203ENST00000578516 PCDHA1Q9Y5I3 950 aa25.15■■□□□ 1.62
CDC42EP4-203ENST00000578516 EIF5BO60841 1220 aaKnown RBP25.14■■□□□ 1.62
CDC42EP4-203ENST00000578516 NEK4P51957 841 aa25.14■■□□□ 1.62
CDC42EP4-203ENST00000578516 EVCP57679 992 aa25.14■■□□□ 1.62
CDC42EP4-203ENST00000578516 RPS6P62753 249 aaKnown RBP25.14■■□□□ 1.62
CDC42EP4-203ENST00000578516 OLFML2BQ68BL8 750 aa25.14■■□□□ 1.62
CDC42EP4-203ENST00000578516 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.14■■□□□ 1.62
CDC42EP4-203ENST00000578516 RNF208Q9H0X6 261 aa25.14■■□□□ 1.62
CDC42EP4-203ENST00000578516 RBM28Q9NW13 759 aaKnown RBP25.14■■□□□ 1.62
CDC42EP4-203ENST00000578516 PFASO15067 1338 aa25.13■■□□□ 1.61
CDC42EP4-203ENST00000578516 BRCA2P51587 3418 aa25.13■■□□□ 1.61
CDC42EP4-203ENST00000578516 MFSD14CQ5VZR4 134 aa25.13■■□□□ 1.61
CDC42EP4-203ENST00000578516 RNF207Q6ZRF8 634 aa25.13■■□□□ 1.61
CDC42EP4-203ENST00000578516 LZTS2Q9BRK4 669 aa25.13■■□□□ 1.61
CDC42EP4-203ENST00000578516 CYBAP13498 195 aa25.12■■□□□ 1.61
CDC42EP4-203ENST00000578516 RBM25P49756 843 aaKnown RBP25.12■■□□□ 1.61
CDC42EP4-203ENST00000578516 ANO1Q5XXA6 986 aa25.12■■□□□ 1.61
CDC42EP4-203ENST00000578516 PHKBQ93100 1093 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms