RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 PDIA4P13667 645 aaKnown RBP16■□□□□ 0.15
LINC01543-201ENST00000578367 ERCC3P19447 782 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 HOXD10P28358 340 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 CTCFP49711 727 aaPredicted RBP16■□□□□ 0.15
LINC01543-201ENST00000578367 PRMT2P55345 433 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 PKN1Q16512 942 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 MCTP2Q6DN12 878 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 GALNT17Q6IS24 598 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 CMTR1Q8N1G2 835 aaKnown RBP16■□□□□ 0.15
LINC01543-201ENST00000578367 CCDC148Q8NFR7 591 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 PHKBQ93100 1093 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 TRERF1Q96PN7 1200 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 R3HDMLQ9H3Y0 253 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 ORC3Q9UBD5 711 aaPredicted RBP16■□□□□ 0.15
LINC01543-201ENST00000578367 IVNS1ABPQ9Y6Y0 642 aa16■□□□□ 0.15
LINC01543-201ENST00000578367 PFASO15067 1338 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 SLC15A5A6NIM6 579 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 FCER1AP12319 257 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 ALAS1P13196 640 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 ST3GAL1Q11201 340 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 PLEKHH3Q7Z736 793 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 NCAPG2Q86XI2 1143 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 SOCS4Q8WXH5 440 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 COA7Q96BR5 231 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 RNF146Q9NTX7 359 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 SLC5A4Q9NY91 659 aa15.99■□□□□ 0.15
LINC01543-201ENST00000578367 LOC102724159A0A0B4J2E5 919 aa15.98■□□□□ 0.15
LINC01543-201ENST00000578367 PPP1R11O60927 126 aaPredicted RBP15.98■□□□□ 0.15
LINC01543-201ENST00000578367 GNA11P29992 359 aa15.98■□□□□ 0.15
LINC01543-201ENST00000578367 KCTD2Q14681 263 aa15.98■□□□□ 0.15
LINC01543-201ENST00000578367 PWP2Q15269 919 aaKnown RBP15.98■□□□□ 0.15
LINC01543-201ENST00000578367 HEATR3Q7Z4Q2 680 aa15.98■□□□□ 0.15
LINC01543-201ENST00000578367 GPR142Q7Z601 462 aa15.98■□□□□ 0.15
LINC01543-201ENST00000578367 ZNF296Q8WUU4 475 aaPredicted RBP15.98■□□□□ 0.15
LINC01543-201ENST00000578367 PORCNQ9H237 461 aa15.98■□□□□ 0.15
LINC01543-201ENST00000578367 CWC22Q9HCG8 908 aaKnown RBP15.98■□□□□ 0.15
LINC01543-201ENST00000578367 STXBP3O00186 592 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 PIK3CDO00329 1044 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 TNPO2O14787 897 aaKnown RBP15.97■□□□□ 0.15
LINC01543-201ENST00000578367 HSPA1AP0DMV8 641 aaKnown RBP15.97■□□□□ 0.15
LINC01543-201ENST00000578367 HSPA1BP0DMV9 641 aaKnown RBP15.97■□□□□ 0.15
LINC01543-201ENST00000578367 FDPSP14324 419 aaKnown RBP15.97■□□□□ 0.15
LINC01543-201ENST00000578367 PTPREP23469 700 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 CALML3P27482 149 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 PSMC4P43686 418 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 MRPL12P52815 198 aaKnown RBP15.97■□□□□ 0.15
LINC01543-201ENST00000578367 SNAP25P60880 206 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 GRB14Q14449 540 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 WWC2Q6AWC2 1192 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 FAM184AQ8NB25 1140 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 BICD2Q8TD16 824 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 CLEC4DQ8WXI8 215 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 ZMYND12Q9H0C1 365 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 EFCC1Q9HA90 598 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 SMC3Q9UQE7 1217 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 DIS3Q9Y2L1 958 aaKnown RBP15.97■□□□□ 0.15
LINC01543-201ENST00000578367 RIPK3Q9Y572 518 aa15.97■□□□□ 0.15
LINC01543-201ENST00000578367 CEP350Q5VT06 3117 aa15.96■□□□□ 0.15
LINC01543-201ENST00000578367 HOXC6P09630 235 aa15.96■□□□□ 0.15
LINC01543-201ENST00000578367 HSPA8P11142 646 aaKnown RBP15.96■□□□□ 0.15
LINC01543-201ENST00000578367 ANP32AP39687 249 aaKnown RBP15.96■□□□□ 0.15
LINC01543-201ENST00000578367 NAPAP54920 295 aa15.96■□□□□ 0.15
LINC01543-201ENST00000578367 USH1GQ495M9 461 aa15.96■□□□□ 0.15
LINC01543-201ENST00000578367 TRMT44Q8IYL2 757 aaKnown RBP15.96■□□□□ 0.15
LINC01543-201ENST00000578367 MMP19Q99542 508 aa15.96■□□□□ 0.15
LINC01543-201ENST00000578367 NUDT12Q9BQG2 462 aa15.96■□□□□ 0.15
LINC01543-201ENST00000578367 PSTPIP2Q9H939 334 aa15.96■□□□□ 0.15
LINC01543-201ENST00000578367 C6orf50Q9HD87 102 aa15.96■□□□□ 0.15
LINC01543-201ENST00000578367 PARP14Q460N5 1801 aa15.96■□□□□ 0.14
LINC01543-201ENST00000578367 GCOM1H8Y6P7 765 aaPredicted RBP15.95■□□□□ 0.14
LINC01543-201ENST00000578367 FOXN1O15353 648 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 FOSP01100 380 aaPredicted RBP15.95■□□□□ 0.14
LINC01543-201ENST00000578367 POLR2MP0CAP2 368 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 XRCC5P13010 732 aaKnown RBP15.95■□□□□ 0.14
LINC01543-201ENST00000578367 PDCP20941 246 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 HSD17B4P51659 736 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 TRIM29Q14134 588 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 MORN1Q5T089 497 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 ANKRD35Q8N283 1001 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 MSL3Q8N5Y2 521 aaKnown RBP15.95■□□□□ 0.14
LINC01543-201ENST00000578367 PIBF1Q8WXW3 757 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 CUL5Q93034 780 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 DDX11Q96FC9 970 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 TRIM47Q96LD4 638 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 ALG1Q9BT22 464 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 RIC8AQ9NPQ8 531 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 A1CFQ9NQ94 594 aaKnown RBP15.95■□□□□ 0.14
LINC01543-201ENST00000578367 CYP39A1Q9NYL5 469 aa15.95■□□□□ 0.14
LINC01543-201ENST00000578367 DNAJC25-GNG10A0A024R161 153 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 hCG_1642624A0A1W2PR95 340 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 B4DLN1 442 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 NFIBO00712 420 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 JAK2O60674 1132 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 MAP2K5Q13163 448 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 IRF5Q13568 498 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 MUM1L1Q5H9M0 696 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 RNF207Q6ZRF8 634 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 ZNF467Q7Z7K2 595 aaPredicted RBP15.94■□□□□ 0.14
LINC01543-201ENST00000578367 DAGLBQ8NCG7 672 aa15.94■□□□□ 0.14
LINC01543-201ENST00000578367 DNERQ8NFT8 737 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms