RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 GRM4Q14833 912 aa13.53□□□□□ -0.24
GGA3-204ENST00000578208 ANO1Q5XXA6 986 aa13.53□□□□□ -0.24
GGA3-204ENST00000578208 FBXO11Q86XK2 927 aa13.53□□□□□ -0.24
GGA3-204ENST00000578208 TMTC2Q8N394 836 aa13.53□□□□□ -0.24
GGA3-204ENST00000578208 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
GGA3-204ENST00000578208 NUP133Q8WUM0 1156 aa13.53□□□□□ -0.24
GGA3-204ENST00000578208 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
GGA3-204ENST00000578208 ABHD16BQ9H3Z7 469 aa13.53□□□□□ -0.24
GGA3-204ENST00000578208 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.53□□□□□ -0.24
GGA3-204ENST00000578208 CYP39A1Q9NYL5 469 aa13.53□□□□□ -0.24
GGA3-204ENST00000578208 ADD3Q9UEY8 706 aaKnown RBP13.53□□□□□ -0.24
GGA3-204ENST00000578208 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
GGA3-204ENST00000578208 DNM1LO00429 736 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 NFIBO00712 420 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 EVI5O60447 810 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 SNAI1O95863 264 aaPredicted RBP13.52□□□□□ -0.25
GGA3-204ENST00000578208 ZNF865P0CJ78 1059 aaPredicted RBP13.52□□□□□ -0.25
GGA3-204ENST00000578208 CALML3P27482 149 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 KIF5BP33176 963 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 TRAF1Q13077 416 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 BAATQ14032 418 aaPredicted RBP13.52□□□□□ -0.25
GGA3-204ENST00000578208 RNF207Q6ZRF8 634 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 MCF2L2Q86YR7 1114 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 CCDC144CPQ8IYA2 1237 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 ZNF654Q8IZM8 581 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 STAG2Q8N3U4 1231 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 CTCFLQ8NI51 663 aaPredicted RBP13.52□□□□□ -0.25
GGA3-204ENST00000578208 IGDCC4Q8TDY8 1250 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 NEK1Q96PY6 1258 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 JMJD4Q9H9V9 463 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 LY9Q9HBG7 655 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 XPNPEP3Q9NQH7 507 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 MAD2L2Q9UI95 211 aa13.52□□□□□ -0.25
GGA3-204ENST00000578208 MRPL11Q9Y3B7 192 aaKnown RBP13.52□□□□□ -0.25
GGA3-204ENST00000578208 PALM3A6NDB9 673 aaPredicted RBP13.51□□□□□ -0.25
GGA3-204ENST00000578208 SOWAHBA6NEL2 793 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 SH2B2O14492 632 aaPredicted RBP13.51□□□□□ -0.25
GGA3-204ENST00000578208 CALM1P0DP23 149 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 CALM2P0DP24 149 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 CALM3P0DP25 149 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 SYNE3Q6ZMZ3 975 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 FGD4Q96M96 766 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 AMNQ9BXJ7 453 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 SENP2Q9HC62 589 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 BRCA2P51587 3418 aa13.51□□□□□ -0.25
GGA3-204ENST00000578208 LOC102724159A0A0B4J2E5 919 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 B4DLN1 442 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 ZBTB5O15062 677 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
GGA3-204ENST00000578208 LIFRP42702 1097 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 GNAQP50148 359 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
GGA3-204ENST00000578208 ALDH5A1P51649 535 aaPredicted RBP13.5□□□□□ -0.25
GGA3-204ENST00000578208 MRPL12P52815 198 aaKnown RBP13.5□□□□□ -0.25
GGA3-204ENST00000578208 TROAPQ12815 778 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 PWP2Q15269 919 aaKnown RBP13.5□□□□□ -0.25
GGA3-204ENST00000578208 GJC2Q5T442 439 aaPredicted RBP13.5□□□□□ -0.25
GGA3-204ENST00000578208 SLC30A10Q6XR72 485 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 RNF180Q86T96 592 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 CLEC4DQ8WXI8 215 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 MAP3K14Q99558 947 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 LZTS2Q9BRK4 669 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 MAF1Q9H063 256 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 SPC25Q9HBM1 224 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 SLC12A7Q9Y666 1083 aa13.5□□□□□ -0.25
GGA3-204ENST00000578208 TNRC18O15417 2968 aaPredicted RBP13.49□□□□□ -0.25
GGA3-204ENST00000578208 COL6A1P12109 1028 aa13.49□□□□□ -0.25
GGA3-204ENST00000578208 RPS6P62753 249 aaKnown RBP13.49□□□□□ -0.25
GGA3-204ENST00000578208 FGD1P98174 961 aa13.49□□□□□ -0.25
GGA3-204ENST00000578208 LRRC41Q15345 812 aa13.49□□□□□ -0.25
GGA3-204ENST00000578208 TSGA10IPQ3SY00 556 aa13.49□□□□□ -0.25
GGA3-204ENST00000578208 NOL8Q76FK4 1167 aaKnown RBP13.49□□□□□ -0.25
GGA3-204ENST00000578208 RGS22Q8NE09 1264 aa13.49□□□□□ -0.25
GGA3-204ENST00000578208 DNERQ8NFT8 737 aa13.49□□□□□ -0.25
GGA3-204ENST00000578208 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
GGA3-204ENST00000578208 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
GGA3-204ENST00000578208 SENP6Q9GZR1 1112 aaPredicted RBP13.49□□□□□ -0.25
GGA3-204ENST00000578208 GPHNQ9NQX3 736 aaPredicted RBP13.49□□□□□ -0.25
GGA3-204ENST00000578208 DUSP11O75319 330 aaKnown RBP13.48□□□□□ -0.25
GGA3-204ENST00000578208 PGK1P00558 417 aa13.48□□□□□ -0.25
GGA3-204ENST00000578208 PDE4DQ08499 809 aa13.48□□□□□ -0.25
GGA3-204ENST00000578208 CCDC144BQ3MJ40 725 aa13.48□□□□□ -0.25
GGA3-204ENST00000578208 DHX32Q7L7V1 743 aaKnown RBP13.48□□□□□ -0.25
GGA3-204ENST00000578208 C7orf61Q8IZ16 206 aa13.48□□□□□ -0.25
GGA3-204ENST00000578208 RRP36Q96EU6 259 aaKnown RBP13.48□□□□□ -0.25
GGA3-204ENST00000578208 PIGSQ96S52 555 aa13.48□□□□□ -0.25
GGA3-204ENST00000578208 RIOX1Q9H6W3 641 aa13.48□□□□□ -0.25
GGA3-204ENST00000578208 VTA1Q9NP79 307 aa13.48□□□□□ -0.25
GGA3-204ENST00000578208 SEC63Q9UGP8 760 aaKnown RBP13.48□□□□□ -0.25
GGA3-204ENST00000578208 PCDHA1Q9Y5I3 950 aa13.48□□□□□ -0.25
GGA3-204ENST00000578208 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
GGA3-204ENST00000578208 SYNRGQ9UMZ2 1314 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 H0YGN5 161 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 EPB41L2O43491 1005 aaKnown RBP13.47□□□□□ -0.25
GGA3-204ENST00000578208 CFBP00751 764 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 PSMA5P28066 241 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 HSPA4P34932 840 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms