RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 LMOD1P29536 600 aaPredicted RBP31.34■■■□□ 2.61
LIMD2-203ENST00000578067 UBA7P41226 1012 aa31.34■■■□□ 2.61
LIMD2-203ENST00000578067 MMP14P50281 582 aa31.34■■■□□ 2.61
LIMD2-203ENST00000578067 KARSQ15046 597 aaKnown RBP31.34■■■□□ 2.61
LIMD2-203ENST00000578067 UBE2SQ16763 222 aa31.34■■■□□ 2.61
LIMD2-203ENST00000578067 SGIP1Q9BQI5 828 aa31.34■■■□□ 2.61
LIMD2-203ENST00000578067 DISC1Q9NRI5 854 aa31.34■■■□□ 2.61
LIMD2-203ENST00000578067 BCS1LQ9Y276 419 aa31.34■■■□□ 2.61
LIMD2-203ENST00000578067 STAT6P42226 847 aa31.33■■■□□ 2.61
LIMD2-203ENST00000578067 NBPF9Q3BBW0 867 aa31.33■■■□□ 2.61
LIMD2-203ENST00000578067 PCDHA1Q9Y5I3 950 aa31.33■■■□□ 2.61
LIMD2-203ENST00000578067 CASP1P29466 404 aa31.32■■■□□ 2.61
LIMD2-203ENST00000578067 PP2D1A8MPX8 630 aa31.32■■■□□ 2.6
LIMD2-203ENST00000578067 GTPBP6O43824 516 aaPredicted RBP31.32■■■□□ 2.6
LIMD2-203ENST00000578067 TNNI2P48788 182 aa31.32■■■□□ 2.6
LIMD2-203ENST00000578067 CT47A1Q5JQC4 288 aaPredicted RBP31.32■■■□□ 2.6
LIMD2-203ENST00000578067 STAMQ92783 540 aa31.32■■■□□ 2.6
LIMD2-203ENST00000578067 ZBTB21Q9ULJ3 1066 aa31.32■■■□□ 2.6
LIMD2-203ENST00000578067 TMEM232C9JQI7 657 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 SYDE2Q5VT97 1194 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 RRAGBQ5VZM2 374 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 BTNL9Q6UXG8 535 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 EDIL3O43854 480 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 POTEDQ86YR6 584 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 CDAN1Q8IWY9 1227 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 MTRQ99707 1265 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 IFNKQ9P0W0 207 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 PGAP2Q9UHJ9 254 aa31.31■■■□□ 2.6
LIMD2-203ENST00000578067 LTBP3Q9NS15 1303 aa31.3■■■□□ 2.6
LIMD2-203ENST00000578067 RPS12P25398 132 aaKnown RBP31.3■■■□□ 2.6
LIMD2-203ENST00000578067 IKQ13123 557 aaPredicted RBP31.3■■■□□ 2.6
LIMD2-203ENST00000578067 RASSF8Q8NHQ8 419 aa31.3■■■□□ 2.6
LIMD2-203ENST00000578067 XPO4Q9C0E2 1151 aaKnown RBP31.3■■■□□ 2.6
LIMD2-203ENST00000578067 TMX2Q9Y320 296 aa31.3■■■□□ 2.6
LIMD2-203ENST00000578067 SHTN1A0MZ66 631 aa31.29■■■□□ 2.6
LIMD2-203ENST00000578067 ERCC5P28715 1186 aaPredicted RBP31.29■■■□□ 2.6
LIMD2-203ENST00000578067 ZNF280AP59817 542 aaPredicted RBP31.29■■■□□ 2.6
LIMD2-203ENST00000578067 FANCCQ00597 558 aa31.29■■■□□ 2.6
LIMD2-203ENST00000578067 CCDC144BQ3MJ40 725 aa31.29■■■□□ 2.6
LIMD2-203ENST00000578067 ENOX1Q8TC92 643 aaKnown RBP31.29■■■□□ 2.6
LIMD2-203ENST00000578067 MTMR9Q96QG7 549 aa31.29■■■□□ 2.6
LIMD2-203ENST00000578067 AMNQ9BXJ7 453 aa31.29■■■□□ 2.6
LIMD2-203ENST00000578067 GOLGB1Q14789 3259 aaKnown RBP31.29■■■□□ 2.6
LIMD2-203ENST00000578067 ECE1P42892 770 aa31.29■■■□□ 2.6
LIMD2-203ENST00000578067 CALCRLQ16602 461 aa31.29■■■□□ 2.6
LIMD2-203ENST00000578067 BLZF1Q9H2G9 400 aa31.29■■■□□ 2.6
LIMD2-203ENST00000578067 FANCLQ9NW38 375 aa31.29■■■□□ 2.6
LIMD2-203ENST00000578067 TDP2O95551 362 aa31.28■■■□□ 2.6
LIMD2-203ENST00000578067 FMR1Q06787 632 aaKnown RBP eCLIP31.28■■■□□ 2.6
LIMD2-203ENST00000578067 PPP4R3AQ6IN85 833 aa31.28■■■□□ 2.6
LIMD2-203ENST00000578067 MIGA2Q7L4E1 593 aa31.28■■■□□ 2.6
LIMD2-203ENST00000578067 ATP1A3P13637 1013 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 TECP42680 631 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 CUL4BQ13620 913 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 NAALADL2Q58DX5 795 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 CABP7Q86V35 215 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 ACER1Q8TDN7 264 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 GOPCQ9HD26 462 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 MAP3K10Q02779 954 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 FBXO11Q86XK2 927 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 SPICE1Q8N0Z3 855 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 IGSF22Q8N9C0 903 aa31.27■■■□□ 2.6
LIMD2-203ENST00000578067 SLC37A4O43826 429 aa31.26■■■□□ 2.59
LIMD2-203ENST00000578067 CAP2P40123 477 aa31.26■■■□□ 2.59
LIMD2-203ENST00000578067 TXKP42681 527 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 CUEDC2Q9H467 287 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L15C9J2P7 530 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L13C9JLJ4 530 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L11C9JVI0 530 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L18D6R9N7 530 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L22D6RA61 530 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L17D6RBQ6 530 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L19D6RCP7 530 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L20D6RJB6 530 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 SNAP25P60880 206 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L24Q0WX57 530 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 USP17L6PQ6QN14 398 aa31.25■■■□□ 2.59
LIMD2-203ENST00000578067 FXR2P51116 673 aaKnown RBP eCLIP31.24■■■□□ 2.59
LIMD2-203ENST00000578067 NAP1L4Q99733 375 aaKnown RBP31.24■■■□□ 2.59
LIMD2-203ENST00000578067 RMND1Q9NWS8 449 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 NFE2L3Q9Y4A8 694 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 CBFA2T2O43439 604 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 SERPINC1P01008 464 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 GCFC2P16383 781 aaKnown RBP31.24■■■□□ 2.59
LIMD2-203ENST00000578067 RASSF7Q02833 373 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 TMEM266Q2M3C6 531 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 MED15Q96RN5 788 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 IMPACTQ9P2X3 320 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 PRR12Q9ULL5 1215 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 PYCARDQ9ULZ3 195 aa31.24■■■□□ 2.59
LIMD2-203ENST00000578067 MYL1P05976 194 aa31.23■■■□□ 2.59
LIMD2-203ENST00000578067 PTGER2P43116 358 aa31.23■■■□□ 2.59
LIMD2-203ENST00000578067 STAT2P52630 851 aa31.23■■■□□ 2.59
LIMD2-203ENST00000578067 RASA3Q14644 834 aa31.23■■■□□ 2.59
LIMD2-203ENST00000578067 KIAA1755Q5JYT7 1200 aa31.23■■■□□ 2.59
LIMD2-203ENST00000578067 MCTP2Q6DN12 878 aa31.23■■■□□ 2.59
LIMD2-203ENST00000578067 TRMT44Q8IYL2 757 aaKnown RBP31.23■■■□□ 2.59
LIMD2-203ENST00000578067 KIAA1524Q8TCG1 905 aa31.23■■■□□ 2.59
LIMD2-203ENST00000578067 PLIN2Q99541 437 aa31.23■■■□□ 2.59
LIMD2-203ENST00000578067 MAGEF1Q9HAY2 307 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms