RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 MAP3K14Q99558 947 aa25.83■■□□□ 1.73
SMARCD2-206ENST00000577990 HTATIP2Q9BUP3 242 aa25.83■■□□□ 1.73
SMARCD2-206ENST00000577990 USP26Q9BXU7 913 aa25.83■■□□□ 1.73
SMARCD2-206ENST00000577990 JMJD4Q9H9V9 463 aa25.83■■□□□ 1.73
SMARCD2-206ENST00000577990 VAT1LQ9HCJ6 419 aa25.83■■□□□ 1.73
SMARCD2-206ENST00000577990 PAWRQ96IZ0 340 aaKnown RBP25.82■■□□□ 1.72
SMARCD2-206ENST00000577990 JAKMIP1Q96N16 626 aaKnown RBP25.82■■□□□ 1.72
SMARCD2-206ENST00000577990 TINF2Q9BSI4 451 aa25.82■■□□□ 1.72
SMARCD2-206ENST00000577990 MYL10Q9BUA6 226 aa25.82■■□□□ 1.72
SMARCD2-206ENST00000577990 MYH6P13533 1939 aa25.82■■□□□ 1.72
SMARCD2-206ENST00000577990 POTEB2H3BUK9 544 aa25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 CYBAP13498 195 aa25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 CAPN2P17655 700 aa25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 QRICH1Q2TAL8 776 aa25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 HABP4Q5JVS0 413 aaKnown RBP25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 NSMFQ6X4W1 530 aa25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 ZNF467Q7Z7K2 595 aaPredicted RBP25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 SGMS1Q86VZ5 419 aa25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 MSL3Q8N5Y2 521 aaKnown RBP25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 CTCFLQ8NI51 663 aaPredicted RBP25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 TCEANC2Q96MN5 208 aa25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 SLC12A7Q9Y666 1083 aa25.81■■□□□ 1.72
SMARCD2-206ENST00000577990 NFIBO00712 420 aa25.8■■□□□ 1.72
SMARCD2-206ENST00000577990 KIF5BP33176 963 aa25.8■■□□□ 1.72
SMARCD2-206ENST00000577990 USH1GQ495M9 461 aa25.8■■□□□ 1.72
SMARCD2-206ENST00000577990 FAM133AQ8N9E0 248 aa25.8■■□□□ 1.72
SMARCD2-206ENST00000577990 TRPV1Q8NER1 839 aa25.8■■□□□ 1.72
SMARCD2-206ENST00000577990 CLEC4DQ8WXI8 215 aa25.8■■□□□ 1.72
SMARCD2-206ENST00000577990 MTMR8Q96EF0 704 aa25.8■■□□□ 1.72
SMARCD2-206ENST00000577990 FGD4Q96M96 766 aa25.8■■□□□ 1.72
SMARCD2-206ENST00000577990 CYP39A1Q9NYL5 469 aa25.8■■□□□ 1.72
SMARCD2-206ENST00000577990 CALM1P0DP23 149 aa25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 CALM2P0DP24 149 aa25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 CALM3P0DP25 149 aa25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 SLC35G1Q2M3R5 365 aa25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 MAMDC4Q6UXC1 1216 aa25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 FBXO11Q86XK2 927 aa25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 RIOX1Q9H6W3 641 aa25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 NRBP1Q9UHY1 535 aa25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 COLQQ9Y215 455 aaPredicted RBP25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 ABCB11O95342 1321 aa25.79■■□□□ 1.72
SMARCD2-206ENST00000577990 BAZ2BQ9UIF8 2168 aaKnown RBP25.78■■□□□ 1.72
SMARCD2-206ENST00000577990 PSMA5P28066 241 aa25.78■■□□□ 1.72
SMARCD2-206ENST00000577990 CNGA1P29973 690 aa25.78■■□□□ 1.72
SMARCD2-206ENST00000577990 CNTN2Q02246 1040 aa25.78■■□□□ 1.72
SMARCD2-206ENST00000577990 BLOC1S2Q6QNY1 142 aa25.78■■□□□ 1.72
SMARCD2-206ENST00000577990 SYNGAP1Q96PV0 1343 aa25.78■■□□□ 1.72
SMARCD2-206ENST00000577990 ZBTB5O15062 677 aa25.77■■□□□ 1.72
SMARCD2-206ENST00000577990 CPA1P15085 419 aa25.77■■□□□ 1.72
SMARCD2-206ENST00000577990 PRAMEF19Q5SWL8 479 aa25.77■■□□□ 1.72
SMARCD2-206ENST00000577990 SYNE3Q6ZMZ3 975 aa25.77■■□□□ 1.72
SMARCD2-206ENST00000577990 DDX20Q9UHI6 824 aaKnown RBP25.77■■□□□ 1.72
SMARCD2-206ENST00000577990 PTPDC1A2A3K4 754 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 SOWAHBA6NEL2 793 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 CYTH3O43739 400 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 RXRAP19793 462 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 GNAQP50148 359 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 MNX1P50219 401 aaPredicted RBP25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 BAATQ14032 418 aaPredicted RBP25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 LHX8Q68G74 356 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 NECAB2Q7Z6G3 386 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 MICU3Q86XE3 530 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 HOMER1Q86YM7 354 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 RAB11FIP4Q86YS3 637 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 LZTS2Q9BRK4 669 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 AMNQ9BXJ7 453 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 OGDHLQ9ULD0 1010 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 CNPY2Q9Y2B0 182 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 LCTP09848 1927 aa25.76■■□□□ 1.71
SMARCD2-206ENST00000577990 MCM3APO60318 1980 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 SEPT4O43236 478 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 MSCO60682 206 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 EIF5BO60841 1220 aaKnown RBP25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 CASTP20810 708 aaKnown RBP25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 RPS6KB1P23443 525 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 FGD1P98174 961 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 APOA5Q6Q788 366 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 CHRDL2Q6WN34 429 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 RNF207Q6ZRF8 634 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 CCDC144CPQ8IYA2 1237 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 ANKLE1Q8NAG6 615 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 PIGSQ96S52 555 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 SPZ1Q9BXG8 430 aa25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 MRPL11Q9Y3B7 192 aaKnown RBP25.75■■□□□ 1.71
SMARCD2-206ENST00000577990 EVI5O60447 810 aa25.74■■□□□ 1.71
SMARCD2-206ENST00000577990 SNAI1O95863 264 aaPredicted RBP25.74■■□□□ 1.71
SMARCD2-206ENST00000577990 SLC30A10Q6XR72 485 aa25.74■■□□□ 1.71
SMARCD2-206ENST00000577990 Q6ZUG5 572 aa25.74■■□□□ 1.71
SMARCD2-206ENST00000577990 ARMCX2Q7L311 632 aa25.74■■□□□ 1.71
SMARCD2-206ENST00000577990 RGS22Q8NE09 1264 aa25.74■■□□□ 1.71
SMARCD2-206ENST00000577990 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.74■■□□□ 1.71
SMARCD2-206ENST00000577990 ASTN1O14525 1302 aa25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 ASB14A6NK59 587 aa25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 PPP1R11O60927 126 aaPredicted RBP25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 PLEKHA8P1O95397 391 aa25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 CALML3P27482 149 aa25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 SMARCA1P28370 1054 aa25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 RPS6P62753 249 aaKnown RBP25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 FANCBQ8NB91 859 aa25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 MAF1Q9H063 256 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms