RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 PTGS1P23219 599 aa16.98■□□□□ 0.31
PPP4R1-206ENST00000577779 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
PPP4R1-206ENST00000577779 TTF1Q15361 905 aaPredicted RBP16.98■□□□□ 0.31
PPP4R1-206ENST00000577779 AMOTL1Q8IY63 956 aa16.98■□□□□ 0.31
PPP4R1-206ENST00000577779 SSH3Q8TE77 659 aa16.98■□□□□ 0.31
PPP4R1-206ENST00000577779 GDPD5Q8WTR4 605 aa16.98■□□□□ 0.31
PPP4R1-206ENST00000577779 ZFHX2Q9C0A1 2572 aaPredicted RBP16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 CYP2D7A0A087X1C5 515 aa16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 BCAR3O75815 825 aa16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 SMPD1P17405 629 aa16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 KCNA5P22460 613 aa16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 RFC2P35250 354 aa16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 LEXMQ3ZCV2 418 aa16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 C16orf86Q6ZW13 317 aa16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 CHST13Q8NET6 341 aa16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 FTOQ9C0B1 505 aaKnown RBP eCLIP16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 ARMT1Q9H993 441 aa16.97■□□□□ 0.31
PPP4R1-206ENST00000577779 ZNF536O15090 1300 aa16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 TNKSO95271 1327 aa16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 DCXO43602 365 aa16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 PRKAB2O43741 272 aa16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 IL9P15248 144 aa16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 C12orf60Q5U649 245 aa16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 KIFC2Q96AC6 838 aa16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 HOMER2Q9NSB8 354 aa16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 ATP8A2Q9NTI2 1148 aa16.96■□□□□ 0.31
PPP4R1-206ENST00000577779 TCRBV5S4A2TA0A5A2 114 aa16.95■□□□□ 0.3
PPP4R1-206ENST00000577779 ASB14A6NK59 587 aa16.95■□□□□ 0.3
PPP4R1-206ENST00000577779 ATP8B2P98198 1209 aa16.95■□□□□ 0.3
PPP4R1-206ENST00000577779 PTCRAQ6ISU1 281 aaPredicted RBP16.95■□□□□ 0.3
PPP4R1-206ENST00000577779 SLC38A10Q9HBR0 1119 aa16.95■□□□□ 0.3
PPP4R1-206ENST00000577779 NOP58Q9Y2X3 529 aaKnown RBP16.95■□□□□ 0.3
PPP4R1-206ENST00000577779 WDR87Q6ZQQ6 2873 aa16.95■□□□□ 0.3
PPP4R1-206ENST00000577779 LCHNA4D1U4 455 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 USP17L12C9JPN9 530 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 USP17L21D6R901 530 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 F5H6K3 240 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 NDUFB10O96000 172 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 TRIM27P14373 513 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 KCNJ6P48051 423 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 KLRC3Q07444 240 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 RETREG2Q8NC44 543 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 PDGFCQ9NRA1 345 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 MTUS1Q9ULD2 1270 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 Q9Y3F1 56 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 TET1Q8NFU7 2136 aa16.94■□□□□ 0.3
PPP4R1-206ENST00000577779 TANC1Q9C0D5 1861 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 SOWAHBA6NEL2 793 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 BAIAP3O94812 1187 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 MBD4O95243 580 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 OAZ1P54368 228 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 IQSEC1Q6DN90 963 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 AACSQ86V21 672 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 CLUAP1Q96AJ1 413 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 ZBED2Q9BTP6 218 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 ACAD9Q9H845 621 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 COG6Q9Y2V7 657 aa16.93■□□□□ 0.3
PPP4R1-206ENST00000577779 PTPRSQ13332 1948 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 GRXCR2A6NFK2 248 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 IQCF3P0C7M6 154 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 FAM47CQ5HY64 1035 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 TMEM63BQ5T3F8 832 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 EEPD1Q7L9B9 569 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 FBXO16Q8IX29 292 aaPredicted RBP16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 DDRGK1Q96HY6 314 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 SUGCTQ9HAC7 445 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 POLR3EQ9NVU0 708 aa16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 DDX49Q9Y6V7 483 aaKnown RBP16.92■□□□□ 0.3
PPP4R1-206ENST00000577779 POTEB3A0JP26 581 aa16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 GOLIM4O00461 696 aa16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 PUS10Q3MIT2 529 aaKnown RBP16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 TAPT1Q6NXT6 567 aa16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 POTEBQ6S5H4 581 aa16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 HFE2Q6ZVN8 426 aa16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 TMCO2Q7Z6W1 182 aaPredicted RBP16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 DNAJC2Q99543 621 aaKnown RBP16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 C1orf115Q9H7X2 142 aa16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 A1CFQ9NQ94 594 aaKnown RBP16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 NYAP2Q9P242 653 aa16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 FEM1BQ9UK73 627 aa16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 GREB1LQ9C091 1923 aaPredicted RBP16.91■□□□□ 0.3
PPP4R1-206ENST00000577779 MYL3P08590 195 aa16.9■□□□□ 0.3
PPP4R1-206ENST00000577779 PURAQ00577 322 aaKnown RBP16.9■□□□□ 0.3
PPP4R1-206ENST00000577779 KIAA1211Q6ZU35 1233 aa16.9■□□□□ 0.3
PPP4R1-206ENST00000577779 MFSD14AQ96MC6 490 aa16.9■□□□□ 0.3
PPP4R1-206ENST00000577779 TGS1Q96RS0 853 aaKnown RBP16.9■□□□□ 0.3
PPP4R1-206ENST00000577779 PHOX2BQ99453 314 aa16.9■□□□□ 0.3
PPP4R1-206ENST00000577779 ST18O60284 1047 aa16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 ERVK-21P61565 698 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms