RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 SIAH1Q8IUQ4 282 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 SRBD1Q8N5C6 995 aaKnown RBP11.66□□□□□ -0.54
CRLF3-202ENST00000577725 CTCFLQ8NI51 663 aaPredicted RBP11.66□□□□□ -0.54
CRLF3-202ENST00000577725 ZKSCAN4Q969J2 545 aaPredicted RBP11.66□□□□□ -0.54
CRLF3-202ENST00000577725 WRNIP1Q96S55 665 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 CPVLQ9H3G5 476 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 CABP5Q9NP86 173 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 GJB4Q9NTQ9 266 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 RBM28Q9NW13 759 aaKnown RBP11.66□□□□□ -0.54
CRLF3-202ENST00000577725 MAD2L2Q9UI95 211 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 ZBTB21Q9ULJ3 1066 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 CNTNAP5Q8WYK1 1306 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 CDKL5O76039 1030 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 ZSCAN22P10073 491 aaPredicted RBP11.65□□□□□ -0.54
CRLF3-202ENST00000577725 CYP2C8P10632 490 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 FUT2Q10981 343 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 GRIN2CQ14957 1233 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 FERMT3Q86UX7 667 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 ACER1Q8TDN7 264 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 COA7Q96BR5 231 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 ALG1Q9BT22 464 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 GPCPD1Q9NPB8 672 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 PRKAG2Q9UGJ0 569 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 ISY1Q9ULR0 285 aaKnown RBP11.65□□□□□ -0.54
CRLF3-202ENST00000577725 BDP1A6H8Y1 2624 aa11.65□□□□□ -0.54
CRLF3-202ENST00000577725 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 H3BQV1 296 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 F13A1P00488 732 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 PARP1P09874 1014 aaKnown RBP11.64□□□□□ -0.55
CRLF3-202ENST00000577725 INPP5BP32019 993 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 CAP2P40123 477 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 MAP3K10Q02779 954 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 CCDC96Q2M329 555 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 C9orf50Q5SZB4 431 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 PPM1EQ8WY54 764 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 C8orf76Q96K31 380 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 ZNF341Q9BYN7 854 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 KANSL2Q9H9L4 492 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 NYAP2Q9P242 653 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 KCNH4Q9UQ05 1017 aa11.64□□□□□ -0.55
CRLF3-202ENST00000577725 DOCK1Q14185 1865 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 STK36Q9NRP7 1315 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 A0A1W2PRG0 241 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 PALM3A6NDB9 673 aaPredicted RBP11.63□□□□□ -0.55
CRLF3-202ENST00000577725 PDHBP11177 359 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 PDCP20941 246 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 KIF5BP33176 963 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 MOGSQ13724 837 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 NFKBIBQ15653 356 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 ZYXQ15942 572 aaKnown RBP11.63□□□□□ -0.55
CRLF3-202ENST00000577725 DCAF15Q66K64 600 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 TTBK2Q6IQ55 1244 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 TRIM22Q8IYM9 498 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 NECAB3Q96P71 396 aaPredicted RBP11.63□□□□□ -0.55
CRLF3-202ENST00000577725 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
CRLF3-202ENST00000577725 UBA5Q9GZZ9 404 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 EPHX3Q9H6B9 360 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 KIF3AQ9Y496 699 aa11.63□□□□□ -0.55
CRLF3-202ENST00000577725 V9GY48 417 aaPredicted RBP11.63□□□□□ -0.55
CRLF3-202ENST00000577725 TCHHQ07283 1943 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 KLRF2D3W0D1 207 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 PRPF3O43395 683 aaKnown RBP11.62□□□□□ -0.55
CRLF3-202ENST00000577725 BAG4O95429 457 aaKnown RBP11.62□□□□□ -0.55
CRLF3-202ENST00000577725 NDUFB10O96000 172 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 AKAP17AQ02040 695 aaKnown RBP11.62□□□□□ -0.55
CRLF3-202ENST00000577725 RESTQ13127 1097 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 PKN1Q16512 942 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 KIAA1755Q5JYT7 1200 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 MCTP1Q6DN14 999 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 FAM173BQ6P4H8 233 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 KCTD1Q719H9 257 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 HOOK2Q96ED9 719 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 MAP3K14Q99558 947 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 VAT1LQ9HCJ6 419 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 KCNJ14Q9UNX9 436 aa11.62□□□□□ -0.55
CRLF3-202ENST00000577725 CYTH3O43739 400 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 GPR37L1O60883 481 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 DEXIO95424 95 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 SLC16A2P36021 539 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 GNAQP50148 359 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 ZNF543Q08ER8 600 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 TRIM32Q13049 653 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 PPP2R5BQ15173 497 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 PPP4R3BQ5MIZ7 849 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 KRT40Q6A162 431 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 POTEEQ6S8J3 1075 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 SPICE1Q8N0Z3 855 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 GPKOWQ92917 476 aaPredicted RBP eCLIP11.61□□□□□ -0.55
CRLF3-202ENST00000577725 MKL1Q969V6 931 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 GAS2L1Q99501 681 aaPredicted RBP11.61□□□□□ -0.55
CRLF3-202ENST00000577725 RNF26Q9BY78 433 aaPredicted RBP11.61□□□□□ -0.55
CRLF3-202ENST00000577725 ARHGEF10LQ9HCE6 1279 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 VPS54Q9P1Q0 977 aa11.61□□□□□ -0.55
CRLF3-202ENST00000577725 MYH15Q9Y2K3 1946 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 KIF28PB7ZC32 967 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 F5H6K3 240 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 ASNSP08243 561 aa11.6□□□□□ -0.55
CRLF3-202ENST00000577725 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms