RNA–Protein interactions for RNA: ENST00000577250.1

RIOK3-202, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-202ENST00000577250 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
RIOK3-202ENST00000577250 TLK2Q86UE8 772 aa11.32□□□□□ -0.6
RIOK3-202ENST00000577250 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
RIOK3-202ENST00000577250 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
RIOK3-202ENST00000577250 PARP14Q460N5 1801 aa11.32□□□□□ -0.6
RIOK3-202ENST00000577250 ZNFX1Q9P2E3 1918 aaKnown RBP11.31□□□□□ -0.6
RIOK3-202ENST00000577250 PTPDC1A2A3K4 754 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 SMPD1P17405 629 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 SLC16A2P36021 539 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 ITGA7Q13683 1181 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 GRIN2CQ14957 1233 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 IQSEC1Q6DN90 963 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 FAM126BQ8IXS8 530 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 DCAF4Q8WV16 495 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 TIFAQ96CG3 184 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 KATNBL1Q9H079 304 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 MTIF3Q9H2K0 278 aaKnown RBP11.31□□□□□ -0.6
RIOK3-202ENST00000577250 ZNF576Q9H609 170 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 GPCPD1Q9NPB8 672 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 PDGFCQ9NRA1 345 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 HELLSQ9NRZ9 838 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 CYP39A1Q9NYL5 469 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 ADD3Q9UEY8 706 aaKnown RBP11.31□□□□□ -0.6
RIOK3-202ENST00000577250 ANAPC4Q9UJX5 808 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 DDX49Q9Y6V7 483 aaKnown RBP11.31□□□□□ -0.6
RIOK3-202ENST00000577250 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
RIOK3-202ENST00000577250 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
RIOK3-202ENST00000577250 CTAGE5O15320 804 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 FGBP02675 491 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 ICAM1P05362 532 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 CYP2C18P33260 490 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 SYDE2Q5VT97 1194 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 TTBK2Q6IQ55 1244 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 PSRC1Q6PGN9 363 aaPredicted RBP11.3□□□□□ -0.6
RIOK3-202ENST00000577250 ZNF365Q70YC5 407 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 C16orf59Q7L2K0 433 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 FBXO16Q8IX29 292 aaPredicted RBP11.3□□□□□ -0.6
RIOK3-202ENST00000577250 GAS2L1Q99501 681 aaPredicted RBP11.3□□□□□ -0.6
RIOK3-202ENST00000577250 HIPK3Q9H422 1215 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 MSRAQ9UJ68 235 aa11.3□□□□□ -0.6
RIOK3-202ENST00000577250 GNEQ9Y223 722 aaKnown RBP11.3□□□□□ -0.6
RIOK3-202ENST00000577250 FRMPD2Q68DX3 1309 aaPredicted RBP11.3□□□□□ -0.6
RIOK3-202ENST00000577250 PLXNA1Q9UIW2 1896 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 GRXCR1A8MXD5 290 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 FOXP2O15409 715 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 ORC4O43929 436 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 FGAP02671 866 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 TOP1P11387 765 aaKnown RBP11.29□□□□□ -0.6
RIOK3-202ENST00000577250 PDE1AP54750 535 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 BAATQ14032 418 aaPredicted RBP11.29□□□□□ -0.6
RIOK3-202ENST00000577250 ALX1Q15699 326 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 MCMDC2Q4G0Z9 681 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 PPM1EQ8WY54 764 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 FAM227BQ96M60 508 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
RIOK3-202ENST00000577250 SEZ6LQ9BYH1 1024 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 TRPV6Q9H1D0 765 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 IL23AQ9NPF7 189 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
RIOK3-202ENST00000577250 ASTN1O14525 1302 aa11.29□□□□□ -0.6
RIOK3-202ENST00000577250 CD4P01730 458 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 MYL3P08590 195 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 PTGS1P23219 599 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 CALML3P27482 149 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 PBX2P40425 430 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 CCL23P55773 120 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 RRP1P56182 461 aaKnown RBP11.28□□□□□ -0.6
RIOK3-202ENST00000577250 HAND2P61296 217 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 PSMC6P62333 389 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 NKX3-2P78367 333 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 BRDTQ58F21 947 aaPredicted RBP11.28□□□□□ -0.6
RIOK3-202ENST00000577250 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 MFSD6Q6ZSS7 791 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 SYMPKQ92797 1274 aaKnown RBP11.28□□□□□ -0.6
RIOK3-202ENST00000577250 RILPL2Q969X0 211 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 CRBNQ96SW2 442 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 MPHOSPH6Q99547 160 aaKnown RBP11.28□□□□□ -0.6
RIOK3-202ENST00000577250 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 PBX4Q9BYU1 374 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 WDR11Q9BZH6 1224 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
RIOK3-202ENST00000577250 PNMA2Q9UL42 364 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 Q9Y3F1 56 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 CUL9Q8IWT3 2517 aa11.28□□□□□ -0.6
RIOK3-202ENST00000577250 A0A0D9SFI3 127 aa11.27□□□□□ -0.61
RIOK3-202ENST00000577250 NFIBO00712 420 aa11.27□□□□□ -0.61
RIOK3-202ENST00000577250 SUPT20HL2P0C7V6 817 aa11.27□□□□□ -0.61
RIOK3-202ENST00000577250 IGFBP4P22692 258 aa11.27□□□□□ -0.61
RIOK3-202ENST00000577250 ALDH5A1P51649 535 aaPredicted RBP11.27□□□□□ -0.61
RIOK3-202ENST00000577250 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
RIOK3-202ENST00000577250 PDE4DQ08499 809 aa11.27□□□□□ -0.61
RIOK3-202ENST00000577250 NMIQ13287 307 aaPredicted RBP11.27□□□□□ -0.61
RIOK3-202ENST00000577250 RAB30Q15771 203 aa11.27□□□□□ -0.61
RIOK3-202ENST00000577250 DUSP28Q4G0W2 176 aa11.27□□□□□ -0.61
RIOK3-202ENST00000577250 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms