RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CNTN2Q02246 1040 aa15.9■□□□□ 0.14
COPS3-214ENST00000577246 LRRFIP1Q32MZ4 808 aaKnown RBP15.9■□□□□ 0.14
COPS3-214ENST00000577246 SLFN13Q68D06 897 aa15.9■□□□□ 0.14
COPS3-214ENST00000577246 IQSEC1Q6DN90 963 aa15.9■□□□□ 0.14
COPS3-214ENST00000577246 LRRC47Q8N1G4 583 aaKnown RBP15.9■□□□□ 0.14
COPS3-214ENST00000577246 APPBP2Q92624 585 aa15.9■□□□□ 0.14
COPS3-214ENST00000577246 GPATCH3Q96I76 525 aa15.9■□□□□ 0.14
COPS3-214ENST00000577246 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
COPS3-214ENST00000577246 RNF146Q9NTX7 359 aa15.9■□□□□ 0.14
COPS3-214ENST00000577246 ZBTB40Q9NUA8 1239 aa15.9■□□□□ 0.14
COPS3-214ENST00000577246 GREB1LQ9C091 1923 aaPredicted RBP15.9■□□□□ 0.14
COPS3-214ENST00000577246 TMEM232C9JQI7 657 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 DYNC1LI2O43237 492 aaPredicted RBP15.89■□□□□ 0.13
COPS3-214ENST00000577246 APPP05067 770 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 ZFYP08048 801 aaPredicted RBP15.89■□□□□ 0.13
COPS3-214ENST00000577246 TSPY3P0CV98 308 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 TSPY8P0CW00 308 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 ATP2A2P16615 1042 aaKnown RBP15.89■□□□□ 0.13
COPS3-214ENST00000577246 PDE4BQ07343 736 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 SKIV2LQ15477 1246 aaKnown RBP15.89■□□□□ 0.13
COPS3-214ENST00000577246 SIRT2Q8IXJ6 389 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 MICALL1Q8N3F8 863 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 KBTBD3Q8NAB2 608 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 GMCL1Q96IK5 515 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 NACAP1Q9BZK3 213 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 ECHDC1Q9NTX5 307 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 ASTN1O14525 1302 aa15.89■□□□□ 0.13
COPS3-214ENST00000577246 PLIN4Q96Q06 1357 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 B4GALT4O60513 344 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 ACTN1P12814 892 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 SLC1A4P43007 532 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 TMEM67Q5HYA8 995 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 STAG1Q8WVM7 1258 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 TRERF1Q96PN7 1200 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 TRPV6Q9H1D0 765 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 VTA1Q9NP79 307 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 UMODL1Q5DID0 1318 aa15.88■□□□□ 0.13
COPS3-214ENST00000577246 SOWAHBA6NEL2 793 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 ERC2O15083 957 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 GPAA1O43292 621 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 PLA2G6O60733 806 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 PRDM1O75626 825 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 SMPD1P17405 629 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 RABGGTBP53611 331 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 NEDD1Q8NHV4 660 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 AGBL1Q96MI9 1066 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 WNT8AQ9H1J5 351 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 ALDH8A1Q9H2A2 487 aaPredicted RBP15.87■□□□□ 0.13
COPS3-214ENST00000577246 POLR3EQ9NVU0 708 aa15.87■□□□□ 0.13
COPS3-214ENST00000577246 RNF113AO15541 343 aaKnown RBP15.86■□□□□ 0.13
COPS3-214ENST00000577246 ALAS1P13196 640 aa15.86■□□□□ 0.13
COPS3-214ENST00000577246 BMP1P13497 986 aa15.86■□□□□ 0.13
COPS3-214ENST00000577246 POU3F3P20264 500 aaPredicted RBP15.86■□□□□ 0.13
COPS3-214ENST00000577246 RFC2P35250 354 aa15.86■□□□□ 0.13
COPS3-214ENST00000577246 CPT1AP50416 773 aa15.86■□□□□ 0.13
COPS3-214ENST00000577246 BRDTQ58F21 947 aaPredicted RBP15.86■□□□□ 0.13
COPS3-214ENST00000577246 OSBP2Q969R2 916 aa15.86■□□□□ 0.13
COPS3-214ENST00000577246 SLC9A7Q96T83 725 aa15.86■□□□□ 0.13
COPS3-214ENST00000577246 EPB41L4AQ9HCS5 686 aaPredicted RBP15.86■□□□□ 0.13
COPS3-214ENST00000577246 GPHNQ9NQX3 736 aaPredicted RBP15.86■□□□□ 0.13
COPS3-214ENST00000577246 ADD3Q9UEY8 706 aaKnown RBP15.86■□□□□ 0.13
COPS3-214ENST00000577246 RAPGEFL1Q9UHV5 662 aa15.86■□□□□ 0.13
COPS3-214ENST00000577246 COG5Q9UP83 839 aa15.86■□□□□ 0.13
COPS3-214ENST00000577246 ARIH1Q9Y4X5 557 aaPredicted RBP15.86■□□□□ 0.13
COPS3-214ENST00000577246 GRIN2DO15399 1336 aa15.86■□□□□ 0.13
COPS3-214ENST00000577246 LOC102724159A0A0B4J2E5 919 aa15.85■□□□□ 0.13
COPS3-214ENST00000577246 PATL2C9JE40 543 aaKnown RBP15.85■□□□□ 0.13
COPS3-214ENST00000577246 PSMC6P62333 389 aa15.85■□□□□ 0.13
COPS3-214ENST00000577246 PWP2Q15269 919 aaKnown RBP15.85■□□□□ 0.13
COPS3-214ENST00000577246 KIAA1211Q6ZU35 1233 aa15.85■□□□□ 0.13
COPS3-214ENST00000577246 FBXO16Q8IX29 292 aaPredicted RBP15.85■□□□□ 0.13
COPS3-214ENST00000577246 PHOSPHO2Q8TCD6 241 aa15.85■□□□□ 0.13
COPS3-214ENST00000577246 SCLYQ96I15 445 aa15.85■□□□□ 0.13
COPS3-214ENST00000577246 CYP39A1Q9NYL5 469 aa15.85■□□□□ 0.13
COPS3-214ENST00000577246 HCN4Q9Y3Q4 1203 aa15.85■□□□□ 0.13
COPS3-214ENST00000577246 ZNF536O15090 1300 aa15.85■□□□□ 0.13
COPS3-214ENST00000577246 RAD50Q92878 1312 aa15.85■□□□□ 0.13
COPS3-214ENST00000577246 KIF28PB7ZC32 967 aa15.84■□□□□ 0.13
COPS3-214ENST00000577246 MYOGP15173 224 aa15.84■□□□□ 0.13
COPS3-214ENST00000577246 TFAP4Q01664 338 aa15.84■□□□□ 0.13
COPS3-214ENST00000577246 DUSP28Q4G0W2 176 aa15.84■□□□□ 0.13
COPS3-214ENST00000577246 TAPT1Q6NXT6 567 aa15.84■□□□□ 0.13
COPS3-214ENST00000577246 EEPD1Q7L9B9 569 aa15.84■□□□□ 0.13
COPS3-214ENST00000577246 IFNL3Q8IZI9 196 aa15.84■□□□□ 0.13
COPS3-214ENST00000577246 MPHOSPH6Q99547 160 aaKnown RBP15.84■□□□□ 0.13
COPS3-214ENST00000577246 CCPG1Q9ULG6 757 aa15.84■□□□□ 0.13
COPS3-214ENST00000577246 TNKSO95271 1327 aa15.84■□□□□ 0.13
COPS3-214ENST00000577246 CHD9Q3L8U1 2897 aa15.83■□□□□ 0.13
COPS3-214ENST00000577246 CA3P07451 260 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 MCCP23508 829 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 TFF2Q03403 129 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 RCSD1Q6JBY9 416 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 NSMFQ6X4W1 530 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 RETREG2Q8NC44 543 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 MORC4Q8TE76 937 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 NECAB3Q96P71 396 aaPredicted RBP15.83■□□□□ 0.12
COPS3-214ENST00000577246 NAPBQ9H115 298 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 PDGFCQ9NRA1 345 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 STX8Q9UNK0 236 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 MTCH2Q9Y6C9 303 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms