RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ADD3Q9UEY8 706 aaKnown RBP18.14■□□□□ 0.49
SF3B3-215ENST00000577085 SOWAHBA6NEL2 793 aa18.13■□□□□ 0.49
SF3B3-215ENST00000577085 C6orf222P0C671 652 aaPredicted RBP18.13■□□□□ 0.49
SF3B3-215ENST00000577085 PTH1RQ03431 593 aa18.13■□□□□ 0.49
SF3B3-215ENST00000577085 SART3Q15020 963 aaKnown RBP18.13■□□□□ 0.49
SF3B3-215ENST00000577085 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
SF3B3-215ENST00000577085 FGD4Q96M96 766 aa18.13■□□□□ 0.49
SF3B3-215ENST00000577085 UBE2OQ9C0C9 1292 aaKnown RBP18.13■□□□□ 0.49
SF3B3-215ENST00000577085 UBA5Q9GZZ9 404 aa18.13■□□□□ 0.49
SF3B3-215ENST00000577085 PRDM5Q9NQX1 630 aaPredicted RBP18.13■□□□□ 0.49
SF3B3-215ENST00000577085 PHF24Q9UPV7 400 aa18.13■□□□□ 0.49
SF3B3-215ENST00000577085 SYNRGQ9UMZ2 1314 aa18.13■□□□□ 0.49
SF3B3-215ENST00000577085 NFIBO00712 420 aa18.12■□□□□ 0.49
SF3B3-215ENST00000577085 CALML3P27482 149 aa18.12■□□□□ 0.49
SF3B3-215ENST00000577085 BAATQ14032 418 aaPredicted RBP18.12■□□□□ 0.49
SF3B3-215ENST00000577085 USH1GQ495M9 461 aa18.12■□□□□ 0.49
SF3B3-215ENST00000577085 RNF207Q6ZRF8 634 aa18.12■□□□□ 0.49
SF3B3-215ENST00000577085 NCOA7Q8NI08 942 aa18.12■□□□□ 0.49
SF3B3-215ENST00000577085 GDF15Q99988 308 aa18.12■□□□□ 0.49
SF3B3-215ENST00000577085 TSEN34Q9BSV6 310 aaKnown RBP18.12■□□□□ 0.49
SF3B3-215ENST00000577085 PRO3102Q9H379 93 aa18.12■□□□□ 0.49
SF3B3-215ENST00000577085 WDR19Q8NEZ3 1342 aa18.12■□□□□ 0.49
SF3B3-215ENST00000577085 A0A1W2PQ45 241 aaPredicted RBP18.11■□□□□ 0.49
SF3B3-215ENST00000577085 A0A1W2PQY0 241 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 MOXD2PA6NHM9 499 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 ADAMTS4O75173 837 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 CYP21A2P08686 494 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 BMP8BP34820 402 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 MDM2Q00987 491 aaPredicted RBP18.11■□□□□ 0.49
SF3B3-215ENST00000577085 TNFAIP2Q03169 654 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 CDC37Q16543 378 aaPredicted RBP18.11■□□□□ 0.49
SF3B3-215ENST00000577085 TRIM60Q495X7 471 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 PCSK9Q8NBP7 692 aaKnown RBP18.11■□□□□ 0.49
SF3B3-215ENST00000577085 VTI1AQ96AJ9 217 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 CPVLQ9H3G5 476 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 STARD7Q9NQZ5 370 aa18.11■□□□□ 0.49
SF3B3-215ENST00000577085 B4DLN1 442 aa18.1■□□□□ 0.49
SF3B3-215ENST00000577085 IFIT3O14879 490 aaKnown RBP18.1■□□□□ 0.49
SF3B3-215ENST00000577085 MRPL12P52815 198 aaKnown RBP18.1■□□□□ 0.49
SF3B3-215ENST00000577085 ACLYP53396 1101 aa18.1■□□□□ 0.49
SF3B3-215ENST00000577085 KCNA10Q16322 511 aa18.1■□□□□ 0.49
SF3B3-215ENST00000577085 GNASQ5JWF2 1037 aa18.1■□□□□ 0.49
SF3B3-215ENST00000577085 EEPD1Q7L9B9 569 aa18.1■□□□□ 0.49
SF3B3-215ENST00000577085 ADGRF4Q8IZF3 695 aa18.1■□□□□ 0.49
SF3B3-215ENST00000577085 GLT1D1Q96MS3 346 aa18.1■□□□□ 0.49
SF3B3-215ENST00000577085 AP5M1Q9H0R1 490 aa18.1■□□□□ 0.49
SF3B3-215ENST00000577085 VAT1LQ9HCJ6 419 aa18.1■□□□□ 0.49
SF3B3-215ENST00000577085 CEP290O15078 2479 aa18.09■□□□□ 0.49
SF3B3-215ENST00000577085 E7EWF7 191 aa18.09■□□□□ 0.49
SF3B3-215ENST00000577085 C1orf53Q5VUE5 145 aa18.09■□□□□ 0.49
SF3B3-215ENST00000577085 CASC1Q6TDU7 716 aa18.09■□□□□ 0.49
SF3B3-215ENST00000577085 CYB5R4Q7L1T6 521 aa18.09■□□□□ 0.49
SF3B3-215ENST00000577085 FBXO16Q8IX29 292 aaPredicted RBP18.09■□□□□ 0.49
SF3B3-215ENST00000577085 MAP4K1Q92918 833 aa18.09■□□□□ 0.49
SF3B3-215ENST00000577085 PURBQ96QR8 312 aaKnown RBP18.09■□□□□ 0.49
SF3B3-215ENST00000577085 VTA1Q9NP79 307 aa18.09■□□□□ 0.49
SF3B3-215ENST00000577085 RBM8AQ9Y5S9 174 aaKnown RBP18.09■□□□□ 0.49
SF3B3-215ENST00000577085 DNAH12Q6ZR08 3092 aa18.08■□□□□ 0.49
SF3B3-215ENST00000577085 ABCB11O95342 1321 aa18.08■□□□□ 0.49
SF3B3-215ENST00000577085 LOC102724159A0A0B4J2E5 919 aa18.08■□□□□ 0.48
SF3B3-215ENST00000577085 PQBP1O60828 265 aaKnown RBP18.08■□□□□ 0.48
SF3B3-215ENST00000577085 ALDH5A1P51649 535 aaPredicted RBP18.08■□□□□ 0.48
SF3B3-215ENST00000577085 GJA9P57773 515 aa18.08■□□□□ 0.48
SF3B3-215ENST00000577085 PDE4DQ08499 809 aa18.08■□□□□ 0.48
SF3B3-215ENST00000577085 WTAPQ15007 396 aa18.08■□□□□ 0.48
SF3B3-215ENST00000577085 SNX17Q15036 470 aa18.08■□□□□ 0.48
SF3B3-215ENST00000577085 PWP2Q15269 919 aaKnown RBP18.08■□□□□ 0.48
SF3B3-215ENST00000577085 SLC30A10Q6XR72 485 aa18.08■□□□□ 0.48
SF3B3-215ENST00000577085 TDHQ8IZJ6 230 aa18.08■□□□□ 0.48
SF3B3-215ENST00000577085 CLEC4DQ8WXI8 215 aa18.08■□□□□ 0.48
SF3B3-215ENST00000577085 KATNBL1Q9H079 304 aa18.08■□□□□ 0.48
SF3B3-215ENST00000577085 SMCHD1A6NHR9 2005 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 KLRF2D3W0D1 207 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 ZEB2O60315 1214 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 ASGR1P07306 291 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 CST5P28325 142 aaPredicted RBP18.07■□□□□ 0.48
SF3B3-215ENST00000577085 RPS6P62753 249 aaKnown RBP18.07■□□□□ 0.48
SF3B3-215ENST00000577085 TLE2Q04725 743 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 SEC23AQ15436 765 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 TMEM67Q5HYA8 995 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 IQSEC1Q6DN90 963 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 CATIPQ7Z7H3 387 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 TLK2Q86UE8 772 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 FBXO11Q86XK2 927 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 MCF2L2Q86YR7 1114 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 KLHDC9Q8NEP7 349 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 CCDC136Q96JN2 1154 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 UPF3AQ9H1J1 476 aaKnown RBP18.07■□□□□ 0.48
SF3B3-215ENST00000577085 ANO2Q9NQ90 1003 aa18.07■□□□□ 0.48
SF3B3-215ENST00000577085 DDX49Q9Y6V7 483 aaKnown RBP18.07■□□□□ 0.48
SF3B3-215ENST00000577085 ASTN1O14525 1302 aa18.06■□□□□ 0.48
SF3B3-215ENST00000577085 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.06■□□□□ 0.48
SF3B3-215ENST00000577085 MYADML2A6NDP7 307 aa18.06■□□□□ 0.48
SF3B3-215ENST00000577085 DCDC2CA8MYV0 355 aa18.06■□□□□ 0.48
SF3B3-215ENST00000577085 ADCY6O43306 1168 aa18.06■□□□□ 0.48
SF3B3-215ENST00000577085 CLTBP09497 229 aa18.06■□□□□ 0.48
SF3B3-215ENST00000577085 QRICH1Q2TAL8 776 aa18.06■□□□□ 0.48
SF3B3-215ENST00000577085 BMP2KLQ5H9B9 411 aa18.06■□□□□ 0.48
SF3B3-215ENST00000577085 CHST3Q7LGC8 479 aa18.06■□□□□ 0.48
SF3B3-215ENST00000577085 DNERQ8NFT8 737 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms