RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 MLXIPQ9HAP2 919 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 ANTXR2P58335 489 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 FOXO4P98177 505 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 FAM26FQ5R3K3 315 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 DPH6Q7L8W6 267 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 TC2NQ8N9U0 490 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 CCDC77Q9BR77 488 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 ANKRD2Q9GZV1 360 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 ADAM9Q13443 819 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 TBC1D10BQ4KMP7 808 aaPredicted RBP19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 MYCT1Q8N699 235 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 FAM212AQ96EL1 285 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 ZNF185O15231 689 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 SLC1A4P43007 532 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 PLA2G4AP47712 749 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 CYP2J2P51589 502 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 NNTQ13423 1086 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 TCHPQ9BT92 498 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 RTCBQ9Y3I0 505 aaKnown RBP19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 NCK2O43639 380 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 TFRCP02786 760 aaKnown RBP19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 WDR78Q5VTH9 848 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 MB21D1Q8N884 522 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 BPIFA3Q9BQP9 254 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 RWDD2AQ9UIY3 292 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 FRMD4BQ9Y2L6 1034 aa19.73■□□□□ 0.75
ATPAF1-214ENST00000576409 ALKQ9UM73 1620 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 USP42Q9H9J4 1324 aaKnown RBP19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 DIXDC1Q155Q3 683 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 UAP1Q16222 522 aaPredicted RBP19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 NOA1Q8NC60 698 aaKnown RBP19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 HPS3Q969F9 1004 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 ARMCX3Q9UH62 379 aaPredicted RBP19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 NEO1Q92859 1461 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 ACTN4O43707 911 aaKnown RBP19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 EXOC3O60645 756 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 KRT5P13647 590 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 CAPN12Q6ZSI9 719 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 COA7Q96BR5 231 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 JPH2Q9BR39 696 aaPredicted RBP19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 MTUS1Q9ULD2 1270 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 IKBKGQ9Y6K9 419 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 ATP1A1P05023 1023 aaKnown RBP19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 EEF1GP26641 437 aaKnown RBP19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 PAXIP1Q6ZW49 1069 aaPredicted RBP19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 AP1M1Q9BXS5 423 aa19.72■□□□□ 0.75
ATPAF1-214ENST00000576409 HARSP12081 509 aaKnown RBP19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 VWA3BQ502W6 1294 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 FAM133AQ8N9E0 248 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 HOMER2Q9NSB8 354 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 DNM3Q9UQ16 869 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 A2ML1A8K2U0 1454 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 GOLGA8KD6RF30 607 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 PRPHP41219 470 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 KIF11P52732 1056 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 SEL1L2Q5TEA6 688 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 CACNA2D3Q8IZS8 1091 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 TBCKQ8TEA7 893 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 ALDH8A1Q9H2A2 487 aaPredicted RBP19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 KIAA1024Q9UPX6 916 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 HEG1Q9ULI3 1381 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 MXRA7P84157 204 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 ZBED6P86452 979 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 TPH2Q8IWU9 490 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 PANK4Q9NVE7 773 aa19.71■□□□□ 0.75
ATPAF1-214ENST00000576409 PPFIA4O75335 1185 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 XRCC5P13010 732 aaKnown RBP19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 MAP3K9P80192 1104 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 PRR16Q569H4 304 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 CCDC170Q8IYT3 715 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 PPP1R12CQ9BZL4 782 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 MYO3AQ8NEV4 1616 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 CFBP00751 764 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 SLCO1A2P46721 670 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 PIGBQ92521 554 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 ATP8A1Q9Y2Q0 1164 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 PTPRMP28827 1452 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 RGS16O15492 202 aaPredicted RBP19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 PLCG2P16885 1265 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 NFRKBQ6P4R8 1299 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 SMARCAL1Q9NZC9 954 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 PACSIN2Q9UNF0 486 aaPredicted RBP19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 ADGRB3O60242 1522 aa19.7■□□□□ 0.74
ATPAF1-214ENST00000576409 PABPC4Q13310 644 aaKnown RBP eCLIP19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 VSIG1Q86XK7 387 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 ENAHQ8N8S7 591 aaPredicted RBP19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 RSRC1Q96IZ7 334 aaKnown RBP19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 NKIRAS1Q9NYS0 192 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 USTQ9Y2C2 406 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 BACH1O14867 736 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 SLC16A2P36021 539 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 STAT1P42224 750 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 TCP11Q8WWU5 503 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 ARPP21Q9UBL0 812 aaPredicted RBP19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 H2AFZP0C0S5 128 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 H2AFVQ71UI9 128 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 MARCH10Q8NA82 808 aaPredicted RBP19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 PPP1R14CQ8TAE6 165 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms