RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 TEX13BQ9BXU2 312 aa18.91■□□□□ 0.62
ERCC4-208ENST00000576348 RIC8AQ9NPQ8 531 aa18.91■□□□□ 0.62
ERCC4-208ENST00000576348 HOMER2Q9NSB8 354 aa18.91■□□□□ 0.62
ERCC4-208ENST00000576348 CCDC194A0A1B0GVG4 234 aa18.9■□□□□ 0.62
ERCC4-208ENST00000576348 DEFB115Q30KQ5 88 aa18.9■□□□□ 0.62
ERCC4-208ENST00000576348 MCF2L2Q86YR7 1114 aa18.9■□□□□ 0.62
ERCC4-208ENST00000576348 NOSTRINQ8IVI9 506 aa18.9■□□□□ 0.62
ERCC4-208ENST00000576348 DAGLBQ8NCG7 672 aa18.9■□□□□ 0.62
ERCC4-208ENST00000576348 OXER1Q8TDS5 423 aa18.9■□□□□ 0.62
ERCC4-208ENST00000576348 ZNF396Q96N95 335 aaPredicted RBP18.9■□□□□ 0.62
ERCC4-208ENST00000576348 ADAMTS5Q9UNA0 930 aa18.9■□□□□ 0.62
ERCC4-208ENST00000576348 TAL1P17542 331 aaPredicted RBP18.89■□□□□ 0.61
ERCC4-208ENST00000576348 STAT3P40763 770 aa18.89■□□□□ 0.61
ERCC4-208ENST00000576348 NR5A1Q13285 461 aa18.89■□□□□ 0.61
ERCC4-208ENST00000576348 TKFCQ3LXA3 575 aa18.89■□□□□ 0.61
ERCC4-208ENST00000576348 CYP4F22Q6NT55 531 aa18.89■□□□□ 0.61
ERCC4-208ENST00000576348 KRT25Q7Z3Z0 450 aa18.89■□□□□ 0.61
ERCC4-208ENST00000576348 SHISA4Q96DD7 197 aa18.89■□□□□ 0.61
ERCC4-208ENST00000576348 NOL7Q9UMY1 257 aaKnown RBP18.89■□□□□ 0.61
ERCC4-208ENST00000576348 TESPA1A2RU30 521 aaPredicted RBP18.88■□□□□ 0.61
ERCC4-208ENST00000576348 KIF28PB7ZC32 967 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 GCOM1H8Y6P7 765 aaPredicted RBP18.88■□□□□ 0.61
ERCC4-208ENST00000576348 POLR2MP0CAP2 368 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 CYP2C8P10632 490 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 U2AF2P26368 475 aaKnown RBP eCLIP18.88■□□□□ 0.61
ERCC4-208ENST00000576348 NOGQ13253 232 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 TMEM132BQ14DG7 1078 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 MCTP2Q6DN12 878 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 LBX2Q6XYB7 198 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 FAM43AQ8N2R8 423 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 REPS2Q8NFH8 660 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 RNF146Q9NTX7 359 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 BIN2Q9UBW5 565 aaPredicted RBP18.88■□□□□ 0.61
ERCC4-208ENST00000576348 RABGAP1Q9Y3P9 1069 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 ZNF536O15090 1300 aa18.88■□□□□ 0.61
ERCC4-208ENST00000576348 FAM155AB1AL88 458 aaPredicted RBP18.87■□□□□ 0.61
ERCC4-208ENST00000576348 ATP2A1O14983 1001 aa18.87■□□□□ 0.61
ERCC4-208ENST00000576348 CFBP00751 764 aa18.87■□□□□ 0.61
ERCC4-208ENST00000576348 COPB2P35606 906 aa18.87■□□□□ 0.61
ERCC4-208ENST00000576348 GCLCP48506 637 aaPredicted RBP18.87■□□□□ 0.61
ERCC4-208ENST00000576348 UBE2SQ16763 222 aa18.87■□□□□ 0.61
ERCC4-208ENST00000576348 JAKMIP3Q5VZ66 844 aa18.87■□□□□ 0.61
ERCC4-208ENST00000576348 PIK3AP1Q6ZUJ8 805 aa18.87■□□□□ 0.61
ERCC4-208ENST00000576348 TEX2Q8IWB9 1127 aa18.87■□□□□ 0.61
ERCC4-208ENST00000576348 CCAR1Q8IX12 1150 aaKnown RBP18.87■□□□□ 0.61
ERCC4-208ENST00000576348 RASGRP4Q8TDF6 673 aa18.87■□□□□ 0.61
ERCC4-208ENST00000576348 CAPNS2Q96L46 248 aa18.87■□□□□ 0.61
ERCC4-208ENST00000576348 ZCCHC17Q9NP64 241 aaKnown RBP18.87■□□□□ 0.61
ERCC4-208ENST00000576348 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 RASSF10A6NK89 507 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 SPDYE3A6NKU9 549 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 GOLGA6L22H0YM25 854 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 KRT85P78386 507 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 CCNA1P78396 465 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 NONOQ15233 471 aaKnown RBP eCLIP18.86■□□□□ 0.61
ERCC4-208ENST00000576348 NPY5RQ15761 445 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 PTPN18Q99952 460 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 SPATC1LQ9H0A9 340 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 ACAD9Q9H845 621 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 EHMT1Q9H9B1 1298 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 ZNF214Q9UL59 606 aaPredicted RBP18.86■□□□□ 0.61
ERCC4-208ENST00000576348 PCDHA6Q9UN73 950 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 PCDHA8Q9Y5H6 950 aa18.86■□□□□ 0.61
ERCC4-208ENST00000576348 BAZ2BQ9UIF8 2168 aaKnown RBP18.85■□□□□ 0.61
ERCC4-208ENST00000576348 FOSP01100 380 aaPredicted RBP18.85■□□□□ 0.61
ERCC4-208ENST00000576348 ATP2B1P20020 1258 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 TAF1CQ15572 869 aaPredicted RBP18.85■□□□□ 0.61
ERCC4-208ENST00000576348 MYSM1Q5VVJ2 828 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 FAM173BQ6P4H8 233 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 USP17L6PQ6QN14 398 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 NSMFQ6X4W1 530 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 NCAPG2Q86XI2 1143 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 IFNL1Q8IU54 200 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 CHST13Q8NET6 341 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 GPRC5AQ8NFJ5 357 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 TMEM260Q9NX78 707 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 BTBD7Q9P203 1132 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 FBXO40Q9UH90 709 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 CFAP45Q9UL16 551 aa18.85■□□□□ 0.61
ERCC4-208ENST00000576348 BAG4O95429 457 aaKnown RBP18.84■□□□□ 0.61
ERCC4-208ENST00000576348 SLC25A27O95847 323 aa18.84■□□□□ 0.61
ERCC4-208ENST00000576348 HOXA13P31271 388 aaPredicted RBP18.84■□□□□ 0.61
ERCC4-208ENST00000576348 DNM1Q05193 864 aaKnown RBP18.84■□□□□ 0.61
ERCC4-208ENST00000576348 AP3B2Q13367 1082 aa18.84■□□□□ 0.61
ERCC4-208ENST00000576348 CSPP1Q1MSJ5 1256 aa18.84■□□□□ 0.61
ERCC4-208ENST00000576348 RILPL1Q5EBL4 403 aa18.84■□□□□ 0.61
ERCC4-208ENST00000576348 WDR78Q5VTH9 848 aa18.84■□□□□ 0.61
ERCC4-208ENST00000576348 ATL3Q6DD88 541 aa18.84■□□□□ 0.61
ERCC4-208ENST00000576348 FCHSD1Q86WN1 690 aa18.84■□□□□ 0.61
ERCC4-208ENST00000576348 RIOX2Q8IUF8 465 aa18.84■□□□□ 0.61
ERCC4-208ENST00000576348 REM2Q8IYK8 340 aaPredicted RBP18.84■□□□□ 0.61
ERCC4-208ENST00000576348 RBPJLQ9UBG7 517 aa18.84■□□□□ 0.61
ERCC4-208ENST00000576348 IGF2BP3O00425 579 aaKnown RBP eCLIP18.83■□□□□ 0.6
ERCC4-208ENST00000576348 NFIBO00712 420 aa18.83■□□□□ 0.6
ERCC4-208ENST00000576348 MUM1L1Q5H9M0 696 aa18.83■□□□□ 0.6
ERCC4-208ENST00000576348 SAMD3Q8N6K7 520 aa18.83■□□□□ 0.6
ERCC4-208ENST00000576348 ANKRD13CQ8N6S4 541 aa18.83■□□□□ 0.6
ERCC4-208ENST00000576348 CLEC4DQ8WXI8 215 aa18.83■□□□□ 0.6
ERCC4-208ENST00000576348 TNFRSF25Q93038 417 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms