RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 TMEM87BQ96K49 555 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 MPHOSPH6Q99547 160 aaKnown RBP17.76■□□□□ 0.43
SMG6-220ENST00000576218 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.76■□□□□ 0.43
SMG6-220ENST00000576218 CYP39A1Q9NYL5 469 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 ADD3Q9UEY8 706 aaKnown RBP17.76■□□□□ 0.43
SMG6-220ENST00000576218 NR2E3Q9Y5X4 410 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 TNRC18O15417 2968 aaPredicted RBP17.76■□□□□ 0.43
SMG6-220ENST00000576218 NFIBO00712 420 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 KIF5BP33176 963 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 BAATQ14032 418 aaPredicted RBP17.75■□□□□ 0.43
SMG6-220ENST00000576218 GRM4Q14833 912 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 QRICH1Q2TAL8 776 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 FBXO11Q86XK2 927 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 HOMER1Q86YM7 354 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 TMTC2Q8N394 836 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 STAG2Q8N3U4 1231 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 XPNPEP3Q9NQH7 507 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 FAM184BQ9ULE4 1060 aa17.75■□□□□ 0.43
SMG6-220ENST00000576218 ABCB11O95342 1321 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 GJC2Q5T442 439 aaPredicted RBP17.74■□□□□ 0.43
SMG6-220ENST00000576218 MAMDC4Q6UXC1 1216 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 NOL8Q76FK4 1167 aaKnown RBP17.74■□□□□ 0.43
SMG6-220ENST00000576218 UBE2Q1Q7Z7E8 422 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 ZNF654Q8IZM8 581 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 FAM133AQ8N9E0 248 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 IGDCC4Q8TDY8 1250 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 MTA3Q9BTC8 594 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 ABHD16BQ9H3Z7 469 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 LY9Q9HBG7 655 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 SENP2Q9HC62 589 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 MAD2L2Q9UI95 211 aa17.74■□□□□ 0.43
SMG6-220ENST00000576218 SH2B2O14492 632 aaPredicted RBP17.73■□□□□ 0.43
SMG6-220ENST00000576218 DDAH1O94760 285 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 IGHA2P01877 340 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 TRAF1Q13077 416 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 ACVR2BQ13705 512 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 SLC30A10Q6XR72 485 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 MCF2L2Q86YR7 1114 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 MYL10Q9BUA6 226 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 AMNQ9BXJ7 453 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 LRRC2Q9BYS8 371 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 SENP6Q9GZR1 1112 aaPredicted RBP17.73■□□□□ 0.43
SMG6-220ENST00000576218 JMJD4Q9H9V9 463 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 SPC25Q9HBM1 224 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 MRPL11Q9Y3B7 192 aaKnown RBP17.73■□□□□ 0.43
SMG6-220ENST00000576218 SLC12A7Q9Y666 1083 aa17.73■□□□□ 0.43
SMG6-220ENST00000576218 B4DLN1 442 aa17.72■□□□□ 0.43
SMG6-220ENST00000576218 DNM1LO00429 736 aa17.72■□□□□ 0.43
SMG6-220ENST00000576218 ZBTB5O15062 677 aa17.72■□□□□ 0.43
SMG6-220ENST00000576218 SNAI1O95863 264 aaPredicted RBP17.72■□□□□ 0.43
SMG6-220ENST00000576218 ZNF865P0CJ78 1059 aaPredicted RBP17.72■□□□□ 0.43
SMG6-220ENST00000576218 CALM1P0DP23 149 aa17.72■□□□□ 0.43
SMG6-220ENST00000576218 CALM2P0DP24 149 aa17.72■□□□□ 0.43
SMG6-220ENST00000576218 CALM3P0DP25 149 aa17.72■□□□□ 0.43
SMG6-220ENST00000576218 MRPL12P52815 198 aaKnown RBP17.72■□□□□ 0.43
SMG6-220ENST00000576218 RNF180Q86T96 592 aa17.72■□□□□ 0.43
SMG6-220ENST00000576218 PIBF1Q8WXW3 757 aa17.72■□□□□ 0.43
SMG6-220ENST00000576218 GPHNQ9NQX3 736 aaPredicted RBP17.72■□□□□ 0.43
SMG6-220ENST00000576218 NAP1L2Q9ULW6 460 aaPredicted RBP17.72■□□□□ 0.43
SMG6-220ENST00000576218 FRMPD3Q5JV73 1810 aa17.71■□□□□ 0.43
SMG6-220ENST00000576218 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
SMG6-220ENST00000576218 SOWAHBA6NEL2 793 aa17.71■□□□□ 0.43
SMG6-220ENST00000576218 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.43
SMG6-220ENST00000576218 RPS6P62753 249 aaKnown RBP17.71■□□□□ 0.43
SMG6-220ENST00000576218 TROAPQ12815 778 aa17.71■□□□□ 0.43
SMG6-220ENST00000576218 EEPD1Q7L9B9 569 aa17.71■□□□□ 0.43
SMG6-220ENST00000576218 C7orf61Q8IZ16 206 aa17.71■□□□□ 0.43
SMG6-220ENST00000576218 CLEC4DQ8WXI8 215 aa17.71■□□□□ 0.43
SMG6-220ENST00000576218 LENG1Q96BZ8 264 aaPredicted RBP17.71■□□□□ 0.43
SMG6-220ENST00000576218 FGD4Q96M96 766 aa17.71■□□□□ 0.43
SMG6-220ENST00000576218 SEC63Q9UGP8 760 aaKnown RBP17.71■□□□□ 0.43
SMG6-220ENST00000576218 PGK1P00558 417 aa17.7■□□□□ 0.42
SMG6-220ENST00000576218 GNAQP50148 359 aa17.7■□□□□ 0.42
SMG6-220ENST00000576218 ALDH5A1P51649 535 aaPredicted RBP17.7■□□□□ 0.42
SMG6-220ENST00000576218 PDE4DQ08499 809 aa17.7■□□□□ 0.42
SMG6-220ENST00000576218 CCDC144BQ3MJ40 725 aa17.7■□□□□ 0.42
SMG6-220ENST00000576218 DHX32Q7L7V1 743 aaKnown RBP17.7■□□□□ 0.42
SMG6-220ENST00000576218 MICU3Q86XE3 530 aa17.7■□□□□ 0.42
SMG6-220ENST00000576218 RAB11FIP4Q86YS3 637 aa17.7■□□□□ 0.42
SMG6-220ENST00000576218 TCEANC2Q96MN5 208 aa17.7■□□□□ 0.42
SMG6-220ENST00000576218 JAKMIP1Q96N16 626 aaKnown RBP17.7■□□□□ 0.42
SMG6-220ENST00000576218 PURBQ96QR8 312 aaKnown RBP17.7■□□□□ 0.42
SMG6-220ENST00000576218 PIGSQ96S52 555 aa17.7■□□□□ 0.42
SMG6-220ENST00000576218 PCDHA1Q9Y5I3 950 aa17.7■□□□□ 0.42
SMG6-220ENST00000576218 MKI67P46013 3256 aaKnown RBP17.7■□□□□ 0.42
SMG6-220ENST00000576218 H0YGN5 161 aa17.69■□□□□ 0.42
SMG6-220ENST00000576218 CFBP00751 764 aa17.69■□□□□ 0.42
SMG6-220ENST00000576218 RXRAP19793 462 aa17.69■□□□□ 0.42
SMG6-220ENST00000576218 LIFRP42702 1097 aa17.69■□□□□ 0.42
SMG6-220ENST00000576218 ATN1P54259 1190 aaPredicted RBP17.69■□□□□ 0.42
SMG6-220ENST00000576218 LRRC41Q15345 812 aa17.69■□□□□ 0.42
SMG6-220ENST00000576218 FBXO16Q8IX29 292 aaPredicted RBP17.69■□□□□ 0.42
SMG6-220ENST00000576218 RASEFQ8IZ41 740 aa17.69■□□□□ 0.42
SMG6-220ENST00000576218 RRP36Q96EU6 259 aaKnown RBP17.69■□□□□ 0.42
SMG6-220ENST00000576218 LZTS2Q9BRK4 669 aa17.69■□□□□ 0.42
SMG6-220ENST00000576218 C6orf222P0C671 652 aaPredicted RBP17.68■□□□□ 0.42
SMG6-220ENST00000576218 HSPA4P34932 840 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms