RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CTDP1Q9Y5B0 961 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-215ENST00000576033 WDR19Q8NEZ3 1342 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 POTEFA5A3E0 1075 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 ATP2A1O14983 1001 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 CCND3P30281 292 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-215ENST00000576033 CCNA1P78396 465 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 FGD1P98174 961 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 FUT2Q10981 343 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 MAP2K5Q13163 448 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 RTN1Q16799 776 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 SLC9C1Q4G0N8 1177 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 PRAMEF19Q5SWL8 479 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 TYW1BQ6NUM6 668 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 CCAR1Q8IX12 1150 aaKnown RBP9.19□□□□□ -0.94
CCDC40-215ENST00000576033 NECAB1Q8N987 351 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 SHCBP1Q8NEM2 672 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 TRPV1Q8NER1 839 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 CTCFLQ8NI51 663 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-215ENST00000576033 PHKBQ93100 1093 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 SNX21Q969T3 373 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 MTMR8Q96EF0 704 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 APBA2Q99767 749 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 TPCN1Q9ULQ1 816 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 CYP46A1Q9Y6A2 500 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 NID2Q14112 1375 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 DNAH12Q6ZR08 3092 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 DOCK5Q9H7D0 1870 aa9.19□□□□□ -0.94
CCDC40-215ENST00000576033 SOWAHBA6NEL2 793 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 SLC15A5A6NIM6 579 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 CCDC85CA6NKD9 419 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 RBAK-RBAKDNI3L0D1 243 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 PSMA5P28066 241 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 PDIA3P30101 505 aaKnown RBP9.18□□□□□ -0.94
CCDC40-215ENST00000576033 GRK4P32298 578 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 NT5C2P49902 561 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 METAP2P50579 478 aaKnown RBP eCLIP9.18□□□□□ -0.94
CCDC40-215ENST00000576033 ZNF792Q3KQV3 632 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 TMEM63BQ5T3F8 832 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 ANO1Q5XXA6 986 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 NSMFQ6X4W1 530 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 FANCBQ8NB91 859 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 SOCS4Q8WXH5 440 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 MAML3Q96JK9 1138 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 ZNF333Q96JL9 665 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 ZFP91Q96JP5 570 aaPredicted RBP9.18□□□□□ -0.94
CCDC40-215ENST00000576033 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 TM6SF1Q9BZW5 370 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 UNC93B1Q9H1C4 597 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 MROH8Q9H579 483 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 RIOX1Q9H6W3 641 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 ACAD9Q9H845 621 aa9.18□□□□□ -0.94
CCDC40-215ENST00000576033 DNAJC25-GNG10A0A024R161 153 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 ZBTB5O15062 677 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 ADCY6O43306 1168 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 SLC25A27O95847 323 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 HMGB1P09429 215 aaKnown RBP9.17□□□□□ -0.94
CCDC40-215ENST00000576033 FCER1AP12319 257 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 CCL5P13501 91 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 PRKAR2AP13861 404 aaKnown RBP9.17□□□□□ -0.94
CCDC40-215ENST00000576033 CALML3P27482 149 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 HOXA13P31271 388 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-215ENST00000576033 RGS2P41220 211 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 NEK4P51957 841 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 OAZ1P54368 228 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 ANAPC15P60006 121 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 IRX5P78411 483 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-215ENST00000576033 CACNB2Q08289 660 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-215ENST00000576033 SCRN1Q12765 414 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 IRF5Q13568 498 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 BAATQ14032 418 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-215ENST00000576033 UBE2SQ16763 222 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 WWC2Q6AWC2 1192 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 DPP9Q86TI2 863 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 FBXO11Q86XK2 927 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 ANKRD35Q8N283 1001 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 ARMC5Q96C12 935 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 AIFM3Q96NN9 605 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 MTA3Q9BTC8 594 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 CYP39A1Q9NYL5 469 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 IVNS1ABPQ9Y6Y0 642 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 ALPK3Q96L96 1907 aa9.17□□□□□ -0.94
CCDC40-215ENST00000576033 PTPDC1A2A3K4 754 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 CTDNEP1O95476 244 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 IGHA2P01877 340 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 HMGCRP04035 888 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 FOSBP53539 338 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 UBXN2AP68543 259 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 KCTD2Q14681 263 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 NTRK3Q16288 839 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 ME3Q16798 604 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 EEPD1Q7L9B9 569 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 HEATR3Q7Z4Q2 680 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 FAM133AQ8N9E0 248 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 SLAIN1Q8ND83 568 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 CHST13Q8NET6 341 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 IL31RAQ8NI17 732 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 PGBD1Q96JS3 809 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 SPZ1Q9BXG8 430 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 GJB4Q9NTQ9 266 aa9.16□□□□□ -0.94
CCDC40-215ENST00000576033 BIN2Q9UBW5 565 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms