RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 FBXL16Q8N461 479 aa17.65■□□□□ 0.42
LITAF-217ENST00000575426 RBBP6Q7Z6E9 1792 aaKnown RBP17.65■□□□□ 0.42
LITAF-217ENST00000575426 ABCB11O95342 1321 aa17.65■□□□□ 0.42
LITAF-217ENST00000575426 GOLGA8AA7E2F4 631 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 GOLGA8BA8MQT2 603 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 POTEB2H3BUK9 544 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 CCL5P13501 91 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 PPP2R5BQ15173 497 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 RTN1Q16799 776 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 ZNF792Q3KQV3 632 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 OLFML2BQ68BL8 750 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 RRP36Q96EU6 259 aaKnown RBP17.64■□□□□ 0.41
LITAF-217ENST00000575426 MAML3Q96JK9 1138 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 SPZ1Q9BXG8 430 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 AMNQ9BXJ7 453 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 UPF3BQ9BZI7 483 aaKnown RBP17.64■□□□□ 0.41
LITAF-217ENST00000575426 RNF208Q9H0X6 261 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
LITAF-217ENST00000575426 HMX1Q9NP08 348 aaPredicted RBP17.64■□□□□ 0.41
LITAF-217ENST00000575426 PDRG1Q9NUG6 133 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 SEC63Q9UGP8 760 aaKnown RBP17.64■□□□□ 0.41
LITAF-217ENST00000575426 BRPF3Q9ULD4 1205 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 MRPL11Q9Y3B7 192 aaKnown RBP17.64■□□□□ 0.41
LITAF-217ENST00000575426 MCM3APO60318 1980 aa17.64■□□□□ 0.41
LITAF-217ENST00000575426 PNMA6FA0A0J9YX94 578 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 CCDC196A0A1B0GTZ2 297 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 METAP2P50579 478 aaKnown RBP eCLIP17.63■□□□□ 0.41
LITAF-217ENST00000575426 RCAN1P53805 252 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 MTFR1Q15390 333 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 PIBF1Q8WXW3 757 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 MTMR8Q96EF0 704 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 PIGSQ96S52 555 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 A1CFQ9NQ94 594 aaKnown RBP17.63■□□□□ 0.41
LITAF-217ENST00000575426 FLRT1Q9NZU1 646 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 RPTORQ8N122 1335 aa17.63■□□□□ 0.41
LITAF-217ENST00000575426 DNAJC25-GNG10A0A024R161 153 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 CYTH3O43739 400 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 PLEKHA8P1O95397 391 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 PRKAR2AP13861 404 aaKnown RBP17.62■□□□□ 0.41
LITAF-217ENST00000575426 TAL1P17542 331 aaPredicted RBP17.62■□□□□ 0.41
LITAF-217ENST00000575426 CACNB2Q08289 660 aaPredicted RBP17.62■□□□□ 0.41
LITAF-217ENST00000575426 TRIM32Q13049 653 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 RNF207Q6ZRF8 634 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 MCF2L2Q86YR7 1114 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 CCDC82Q8N4S0 544 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 SRBD1Q8N5C6 995 aaKnown RBP17.62■□□□□ 0.41
LITAF-217ENST00000575426 AGXT2Q9BYV1 514 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 UNC93B1Q9H1C4 597 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 CYP39A1Q9NYL5 469 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 PCDHA1Q9Y5I3 950 aa17.62■□□□□ 0.41
LITAF-217ENST00000575426 KIAA0100Q14667 2235 aaKnown RBP17.62■□□□□ 0.41
LITAF-217ENST00000575426 NFIBO00712 420 aa17.61■□□□□ 0.41
LITAF-217ENST00000575426 CYP2C19P33261 490 aa17.61■□□□□ 0.41
LITAF-217ENST00000575426 SOX10P56693 466 aa17.61■□□□□ 0.41
LITAF-217ENST00000575426 BAATQ14032 418 aaPredicted RBP17.61■□□□□ 0.41
LITAF-217ENST00000575426 IFFO2Q5TF58 517 aa17.61■□□□□ 0.41
LITAF-217ENST00000575426 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
LITAF-217ENST00000575426 CMTR1Q8N1G2 835 aaKnown RBP17.61■□□□□ 0.41
LITAF-217ENST00000575426 MSL3Q8N5Y2 521 aaKnown RBP17.61■□□□□ 0.41
LITAF-217ENST00000575426 TINF2Q9BSI4 451 aa17.61■□□□□ 0.41
LITAF-217ENST00000575426 MAF1Q9H063 256 aa17.61■□□□□ 0.41
LITAF-217ENST00000575426 CALML3P27482 149 aa17.6■□□□□ 0.41
LITAF-217ENST00000575426 CNGA1P29973 690 aa17.6■□□□□ 0.41
LITAF-217ENST00000575426 CNTN2Q02246 1040 aa17.6■□□□□ 0.41
LITAF-217ENST00000575426 ZNF467Q7Z7K2 595 aaPredicted RBP17.6■□□□□ 0.41
LITAF-217ENST00000575426 RGS22Q8NE09 1264 aa17.6■□□□□ 0.41
LITAF-217ENST00000575426 CLEC4DQ8WXI8 215 aa17.6■□□□□ 0.41
LITAF-217ENST00000575426 C22orf23Q9BZE7 217 aa17.6■□□□□ 0.41
LITAF-217ENST00000575426 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.6■□□□□ 0.41
LITAF-217ENST00000575426 ADD3Q9UEY8 706 aaKnown RBP17.6■□□□□ 0.41
LITAF-217ENST00000575426 HTTP42858 3142 aa17.59■□□□□ 0.41
LITAF-217ENST00000575426 LCTP09848 1927 aa17.59■□□□□ 0.41
LITAF-217ENST00000575426 ASB14A6NK59 587 aa17.59■□□□□ 0.41
LITAF-217ENST00000575426 GJB1P08034 283 aa17.59■□□□□ 0.41
LITAF-217ENST00000575426 TOB2Q14106 344 aaPredicted RBP17.59■□□□□ 0.41
LITAF-217ENST00000575426 ANKRD1Q15327 319 aa17.59■□□□□ 0.41
LITAF-217ENST00000575426 SLC35G1Q2M3R5 365 aa17.59■□□□□ 0.41
LITAF-217ENST00000575426 MAP3K21Q5TCX8 1036 aa17.59■□□□□ 0.41
LITAF-217ENST00000575426 FAM133AQ8N9E0 248 aa17.59■□□□□ 0.41
LITAF-217ENST00000575426 MPHOSPH6Q99547 160 aaKnown RBP17.59■□□□□ 0.41
LITAF-217ENST00000575426 CNPY2Q9Y2B0 182 aa17.59■□□□□ 0.41
LITAF-217ENST00000575426 SYNGAP1Q96PV0 1343 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 B4DLN1 442 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 CFBP00751 764 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 CAPN2P17655 700 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 NEK4P51957 841 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 MRPL12P52815 198 aaKnown RBP17.58■□□□□ 0.4
LITAF-217ENST00000575426 EVCP57679 992 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 RPS6P62753 249 aaKnown RBP17.58■□□□□ 0.4
LITAF-217ENST00000575426 MAMDC4Q6UXC1 1216 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 SAMD3Q8N6K7 520 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 IL17RAQ96F46 866 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 ZNF274Q96GC6 653 aaPredicted RBP17.58■□□□□ 0.4
LITAF-217ENST00000575426 DEFB118Q96PH6 123 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 ALDH8A1Q9H2A2 487 aaPredicted RBP17.58■□□□□ 0.4
LITAF-217ENST00000575426 NRBP1Q9UHY1 535 aa17.58■□□□□ 0.4
LITAF-217ENST00000575426 POTEFA5A3E0 1075 aa17.57■□□□□ 0.4
LITAF-217ENST00000575426 PPP1R11O60927 126 aaPredicted RBP17.57■□□□□ 0.4
LITAF-217ENST00000575426 TFRCP02786 760 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms