RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 FGBP02675 491 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 BMP3P12645 472 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 RABGGTBP53611 331 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 TMEM63BQ5T3F8 832 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 SLFN13Q68D06 897 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 ZNF444Q8N0Y2 327 aaPredicted RBP24.71■■□□□ 1.55
SPNS3-203ENST00000575185 APPBP2Q92624 585 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 TRPV6Q9H1D0 765 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 WNT8AQ9H1J5 351 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 SLC28A3Q9HAS3 691 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 RNF146Q9NTX7 359 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 SCN5AQ14524 2016 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 PLIN4Q96Q06 1357 aa24.7■■□□□ 1.55
SPNS3-203ENST00000575185 TMEM232C9JQI7 657 aa24.7■■□□□ 1.54
SPNS3-203ENST00000575185 MRPS5P82675 430 aaKnown RBP24.7■■□□□ 1.54
SPNS3-203ENST00000575185 ITGA7Q13683 1181 aa24.7■■□□□ 1.54
SPNS3-203ENST00000575185 FSCN1Q16658 493 aaKnown RBP24.7■■□□□ 1.54
SPNS3-203ENST00000575185 KBTBD3Q8NAB2 608 aa24.7■■□□□ 1.54
SPNS3-203ENST00000575185 UHRF1Q96T88 793 aaPredicted RBP24.7■■□□□ 1.54
SPNS3-203ENST00000575185 PDGFCQ9NRA1 345 aa24.7■■□□□ 1.54
SPNS3-203ENST00000575185 ECHDC1Q9NTX5 307 aa24.7■■□□□ 1.54
SPNS3-203ENST00000575185 B4GALT4O60513 344 aa24.69■■□□□ 1.54
SPNS3-203ENST00000575185 MYOGP15173 224 aa24.69■■□□□ 1.54
SPNS3-203ENST00000575185 SMPD1P17405 629 aa24.69■■□□□ 1.54
SPNS3-203ENST00000575185 PSMC6P62333 389 aa24.69■■□□□ 1.54
SPNS3-203ENST00000575185 NOC4LQ9BVI4 516 aaKnown RBP24.69■■□□□ 1.54
SPNS3-203ENST00000575185 STAT2P52630 851 aa24.68■■□□□ 1.54
SPNS3-203ENST00000575185 SNAP25P60880 206 aa24.68■■□□□ 1.54
SPNS3-203ENST00000575185 EEPD1Q7L9B9 569 aa24.68■■□□□ 1.54
SPNS3-203ENST00000575185 RASGRP2Q7LDG7 609 aa24.68■■□□□ 1.54
SPNS3-203ENST00000575185 FBXO16Q8IX29 292 aaPredicted RBP24.68■■□□□ 1.54
SPNS3-203ENST00000575185 VWCEQ96DN2 955 aa24.68■■□□□ 1.54
SPNS3-203ENST00000575185 NECAB3Q96P71 396 aaPredicted RBP24.68■■□□□ 1.54
SPNS3-203ENST00000575185 MTIF3Q9H2K0 278 aaKnown RBP24.68■■□□□ 1.54
SPNS3-203ENST00000575185 RNF113AO15541 343 aaKnown RBP24.67■■□□□ 1.54
SPNS3-203ENST00000575185 DYNC1LI2O43237 492 aaPredicted RBP24.67■■□□□ 1.54
SPNS3-203ENST00000575185 APPP05067 770 aa24.67■■□□□ 1.54
SPNS3-203ENST00000575185 IKQ13123 557 aaPredicted RBP24.67■■□□□ 1.54
SPNS3-203ENST00000575185 MICALL1Q8N3F8 863 aa24.67■■□□□ 1.54
SPNS3-203ENST00000575185 SCLYQ96I15 445 aa24.67■■□□□ 1.54
SPNS3-203ENST00000575185 SYNPO2Q9UMS6 1093 aa24.67■■□□□ 1.54
SPNS3-203ENST00000575185 CABYRO75952 493 aa24.66■■□□□ 1.54
SPNS3-203ENST00000575185 TSPY3P0CV98 308 aa24.66■■□□□ 1.54
SPNS3-203ENST00000575185 TSPY8P0CW00 308 aa24.66■■□□□ 1.54
SPNS3-203ENST00000575185 ALAS1P13196 640 aa24.66■■□□□ 1.54
SPNS3-203ENST00000575185 MUM1L1Q5H9M0 696 aa24.66■■□□□ 1.54
SPNS3-203ENST00000575185 PPP2R2DQ66LE6 453 aa24.66■■□□□ 1.54
SPNS3-203ENST00000575185 NEDD1Q8NHV4 660 aa24.66■■□□□ 1.54
SPNS3-203ENST00000575185 TRERF1Q96PN7 1200 aa24.66■■□□□ 1.54
SPNS3-203ENST00000575185 PURBQ96QR8 312 aaKnown RBP24.66■■□□□ 1.54
SPNS3-203ENST00000575185 AP5M1Q9H0R1 490 aa24.66■■□□□ 1.54
SPNS3-203ENST00000575185 ASB14A6NK59 587 aa24.65■■□□□ 1.54
SPNS3-203ENST00000575185 TAPT1Q6NXT6 567 aa24.65■■□□□ 1.54
SPNS3-203ENST00000575185 IFNL3Q8IZI9 196 aa24.65■■□□□ 1.54
SPNS3-203ENST00000575185 SEC62Q99442 399 aaKnown RBP24.65■■□□□ 1.54
SPNS3-203ENST00000575185 CHMP4BQ9H444 224 aaKnown RBP24.65■■□□□ 1.54
SPNS3-203ENST00000575185 ZNF287Q9HBT7 754 aa24.65■■□□□ 1.54
SPNS3-203ENST00000575185 ZBBXA8MT70 800 aa24.64■■□□□ 1.54
SPNS3-203ENST00000575185 GNAT2P19087 354 aa24.64■■□□□ 1.54
SPNS3-203ENST00000575185 MCCP23508 829 aa24.64■■□□□ 1.54
SPNS3-203ENST00000575185 TFAP4Q01664 338 aa24.64■■□□□ 1.54
SPNS3-203ENST00000575185 TFF2Q03403 129 aa24.64■■□□□ 1.54
SPNS3-203ENST00000575185 KCTD1Q719H9 257 aa24.64■■□□□ 1.54
SPNS3-203ENST00000575185 IL27Q8NEV9 243 aa24.64■■□□□ 1.54
SPNS3-203ENST00000575185 STAG1Q8WVM7 1258 aa24.64■■□□□ 1.54
SPNS3-203ENST00000575185 SLC4A7Q9Y6M7 1214 aa24.64■■□□□ 1.54
SPNS3-203ENST00000575185 TANC1Q9C0D5 1861 aa24.64■■□□□ 1.53
SPNS3-203ENST00000575185 FDX1P10109 184 aa24.63■■□□□ 1.53
SPNS3-203ENST00000575185 SLC1A4P43007 532 aa24.63■■□□□ 1.53
SPNS3-203ENST00000575185 FAM160B2Q86V87 743 aa24.63■■□□□ 1.53
SPNS3-203ENST00000575185 GMCL1Q96IK5 515 aa24.63■■□□□ 1.53
SPNS3-203ENST00000575185 CYP39A1Q9NYL5 469 aa24.63■■□□□ 1.53
SPNS3-203ENST00000575185 PRRC2BQ5JSZ5 2229 aaKnown RBP24.62■■□□□ 1.53
SPNS3-203ENST00000575185 PATL2C9JE40 543 aaKnown RBP24.62■■□□□ 1.53
SPNS3-203ENST00000575185 CHURC1Q8WUH1 139 aa24.62■■□□□ 1.53
SPNS3-203ENST00000575185 ALDH8A1Q9H2A2 487 aaPredicted RBP24.62■■□□□ 1.53
SPNS3-203ENST00000575185 TRMT13Q9NUP7 481 aaKnown RBP24.62■■□□□ 1.53
SPNS3-203ENST00000575185 RFXAPO00287 272 aa24.61■■□□□ 1.53
SPNS3-203ENST00000575185 ZEB2O60315 1214 aa24.61■■□□□ 1.53
SPNS3-203ENST00000575185 ZFYP08048 801 aaPredicted RBP24.61■■□□□ 1.53
SPNS3-203ENST00000575185 CYP2C9P11712 490 aa24.61■■□□□ 1.53
SPNS3-203ENST00000575185 RRP1P56182 461 aaKnown RBP24.61■■□□□ 1.53
SPNS3-203ENST00000575185 TTLL4Q14679 1199 aa24.61■■□□□ 1.53
SPNS3-203ENST00000575185 TKFCQ3LXA3 575 aa24.61■■□□□ 1.53
SPNS3-203ENST00000575185 C20orf194Q5TEA3 1177 aa24.61■■□□□ 1.53
SPNS3-203ENST00000575185 PRR12Q9ULL5 1215 aa24.61■■□□□ 1.53
SPNS3-203ENST00000575185 PCDHA11Q9Y5I1 949 aa24.61■■□□□ 1.53
SPNS3-203ENST00000575185 NMT2O60551 498 aa24.6■■□□□ 1.53
SPNS3-203ENST00000575185 ATP2A2P16615 1042 aaKnown RBP24.6■■□□□ 1.53
SPNS3-203ENST00000575185 PDE4BQ07343 736 aa24.6■■□□□ 1.53
SPNS3-203ENST00000575185 PPARAQ07869 468 aa24.6■■□□□ 1.53
SPNS3-203ENST00000575185 IQSEC1Q6DN90 963 aa24.6■■□□□ 1.53
SPNS3-203ENST00000575185 NSMFQ6X4W1 530 aa24.6■■□□□ 1.53
SPNS3-203ENST00000575185 PPP1R13LQ8WUF5 828 aa24.6■■□□□ 1.53
SPNS3-203ENST00000575185 MTMR7Q9Y216 660 aa24.6■■□□□ 1.53
SPNS3-203ENST00000575185 PTPRSQ13332 1948 aa24.6■■□□□ 1.53
SPNS3-203ENST00000575185 COL4A4P53420 1690 aaPredicted RBP24.59■■□□□ 1.53
SPNS3-203ENST00000575185 BMP1P13497 986 aa24.59■■□□□ 1.53
SPNS3-203ENST00000575185 KCNQ1P51787 676 aa24.59■■□□□ 1.53
SPNS3-203ENST00000575185 KIAA1211Q6ZU35 1233 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms