RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-206ENST00000574781 KCNC4Q03721 635 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 FAM109BQ6ICB4 259 aaPredicted RBP9.52□□□□□ -0.89
ERCC4-206ENST00000574781 SNRNP48Q6IEG0 339 aaKnown RBP9.52□□□□□ -0.89
ERCC4-206ENST00000574781 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.89
ERCC4-206ENST00000574781 ZNF444Q8N0Y2 327 aaPredicted RBP9.52□□□□□ -0.89
ERCC4-206ENST00000574781 REPS2Q8NFH8 660 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 VTI1AQ96AJ9 217 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 SLF1Q9BQI6 1058 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 COL25A1Q9BXS0 654 aaPredicted RBP9.52□□□□□ -0.89
ERCC4-206ENST00000574781 CDH23Q9H251 3354 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 CHMP4BQ9H444 224 aaKnown RBP9.52□□□□□ -0.89
ERCC4-206ENST00000574781 TMEM134Q9H6X4 195 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 RAVER2Q9HCJ3 691 aaKnown RBP9.52□□□□□ -0.89
ERCC4-206ENST00000574781 ECHDC1Q9NTX5 307 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 TMEM39AQ9NV64 488 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 ISY1Q9ULR0 285 aaKnown RBP9.52□□□□□ -0.89
ERCC4-206ENST00000574781 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 TACC3Q9Y6A5 838 aa9.52□□□□□ -0.89
ERCC4-206ENST00000574781 NAV1Q8NEY1 1877 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 A0A1W2PQ45 241 aaPredicted RBP9.51□□□□□ -0.89
ERCC4-206ENST00000574781 A0A1W2PQY0 241 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 RNF113AO15541 343 aaKnown RBP9.51□□□□□ -0.89
ERCC4-206ENST00000574781 ZBED4O75132 1171 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 SNAI1O95863 264 aaPredicted RBP9.51□□□□□ -0.89
ERCC4-206ENST00000574781 NDUFB10O96000 172 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 CLTBP09497 229 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 TDO2P48775 406 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 SNX17Q15036 470 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 KCNA10Q16322 511 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
ERCC4-206ENST00000574781 PRPF38AQ8NAV1 312 aaKnown RBP9.51□□□□□ -0.89
ERCC4-206ENST00000574781 MYLIPQ8WY64 445 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 SEC62Q99442 399 aaKnown RBP9.51□□□□□ -0.89
ERCC4-206ENST00000574781 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 ARPP21Q9UBL0 812 aaPredicted RBP9.51□□□□□ -0.89
ERCC4-206ENST00000574781 ZHX1Q9UKY1 873 aaPredicted RBP9.51□□□□□ -0.89
ERCC4-206ENST00000574781 FAM184BQ9ULE4 1060 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 PHF24Q9UPV7 400 aa9.51□□□□□ -0.89
ERCC4-206ENST00000574781 DIS3Q9Y2L1 958 aaKnown RBP9.51□□□□□ -0.89
ERCC4-206ENST00000574781 RLFQ13129 1914 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 BAZ2AQ9UIF9 1905 aaKnown RBP9.5□□□□□ -0.89
ERCC4-206ENST00000574781 SMCHD1A6NHR9 2005 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 MYADML2A6NDP7 307 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 M0R2C6 588 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 GPAA1O43292 621 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 AKR1A1P14550 325 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 ACLYP53396 1101 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 FAAP100Q0VG06 881 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 SBK1Q52WX2 424 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 SWT1Q5T5J6 900 aaKnown RBP9.5□□□□□ -0.89
ERCC4-206ENST00000574781 LRRC47Q8N1G4 583 aaKnown RBP9.5□□□□□ -0.89
ERCC4-206ENST00000574781 ANKRD35Q8N283 1001 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 KBTBD3Q8NAB2 608 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 CEP95Q96GE4 821 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 RNPC3Q96LT9 517 aaKnown RBP9.5□□□□□ -0.89
ERCC4-206ENST00000574781 TEX13BQ9BXU2 312 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 TTYH1Q9H313 450 aaPredicted RBP9.5□□□□□ -0.89
ERCC4-206ENST00000574781 STARD7Q9NQZ5 370 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 NYAP2Q9P242 653 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 NRBP1Q9UHY1 535 aa9.5□□□□□ -0.89
ERCC4-206ENST00000574781 RCCD1A6NED2 376 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 DCDC2CA8MYV0 355 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 PATL2C9JE40 543 aaKnown RBP9.49□□□□□ -0.89
ERCC4-206ENST00000574781 ADAMTS4O75173 837 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 C6orf222P0C671 652 aaPredicted RBP9.49□□□□□ -0.89
ERCC4-206ENST00000574781 SNAP25P60880 206 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 CNTN2Q02246 1040 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 ACVR2BQ13705 512 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 C1orf53Q5VUE5 145 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 NOL8Q76FK4 1167 aaKnown RBP9.49□□□□□ -0.89
ERCC4-206ENST00000574781 METTL3Q86U44 580 aaKnown RBP9.49□□□□□ -0.89
ERCC4-206ENST00000574781 IFNL3Q8IZI9 196 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 MAFAQ8NHW3 353 aaPredicted RBP9.49□□□□□ -0.89
ERCC4-206ENST00000574781 APPBP2Q92624 585 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 DCTPP1Q9H773 170 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 EPB41L4AQ9HCS5 686 aaPredicted RBP9.49□□□□□ -0.89
ERCC4-206ENST00000574781 INCENPQ9NQS7 918 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 DDX49Q9Y6V7 483 aaKnown RBP9.49□□□□□ -0.89
ERCC4-206ENST00000574781 SYNRGQ9UMZ2 1314 aa9.49□□□□□ -0.89
ERCC4-206ENST00000574781 FRMPD3Q5JV73 1810 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 DNAJC25-GNG10A0A024R161 153 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 TMEM232C9JQI7 657 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 KIAA0355O15063 1070 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 ADCY6O43306 1168 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 TSPY3P0CV98 308 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 TSPY8P0CW00 308 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 FECHP22830 423 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 COPB2P35606 906 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 SMAD3P84022 425 aaKnown RBP9.48□□□□□ -0.89
ERCC4-206ENST00000574781 TFAP4Q01664 338 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 FPGSQ05932 587 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 IKQ13123 557 aaPredicted RBP9.48□□□□□ -0.89
ERCC4-206ENST00000574781 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 GNASQ5JWF2 1037 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 SLFN13Q68D06 897 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 GIMAP6Q6P9H5 292 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 KLHDC9Q8NEP7 349 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 OTUD7AQ8TE49 926 aaPredicted RBP9.48□□□□□ -0.89
ERCC4-206ENST00000574781 NUP133Q8WUM0 1156 aa9.48□□□□□ -0.89
ERCC4-206ENST00000574781 MKL1Q969V6 931 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms