RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 CSRNP1Q96S65 589 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 TMOD2Q9NZR1 351 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 TCP10L2B9ZVM9 353 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 PSMD14O00487 310 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 NAALADL2Q58DX5 795 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
USP43-205ENST00000574408 TMEM179Q6ZVK1 233 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 CCSER1Q9C0I3 900 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 GREB1LQ9C091 1923 aaPredicted RBP11.82□□□□□ -0.52
USP43-205ENST00000574408 ZNF646O15015 1829 aaPredicted RBP11.81□□□□□ -0.52
USP43-205ENST00000574408 PPP1R18Q6NYC8 613 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 MKL1Q969V6 931 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 C16orf45Q96MC5 204 aaPredicted RBP11.81□□□□□ -0.52
USP43-205ENST00000574408 RIC8AQ9NPQ8 531 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 PPP1R3GB7ZBB8 358 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 TECP42680 631 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 TERF1P54274 439 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 CABP7Q86V35 215 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 VSTM4Q8IW00 320 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 INTS13Q9NVM9 706 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 CTNND2Q9UQB3 1225 aa11.81□□□□□ -0.52
USP43-205ENST00000574408 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
USP43-205ENST00000574408 TDP2O95551 362 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 GH2P01242 217 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
USP43-205ENST00000574408 TPD52L1Q16890 204 aaPredicted RBP11.8□□□□□ -0.52
USP43-205ENST00000574408 GRIPAP1Q4V328 841 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 CT47A1Q5JQC4 288 aaPredicted RBP11.8□□□□□ -0.52
USP43-205ENST00000574408 SPATA1Q5VX52 437 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 SIAH1Q8IUQ4 282 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 DCAF4Q8WV16 495 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 CUL5Q93034 780 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 AK8Q96MA6 479 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 PSMD1Q99460 953 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 ATRNL1Q5VV63 1379 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 TXKP42681 527 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 DLGAP5Q15398 846 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 QRICH1Q2TAL8 776 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 NUP88Q99567 741 aaPredicted RBP11.8□□□□□ -0.52
USP43-205ENST00000574408 COBLO75128 1261 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 PLCG1P19174 1290 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 KCNA3P22001 575 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
USP43-205ENST00000574408 JAG1P78504 1218 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 CALCRLQ16602 461 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 RBM26Q5T8P6 1007 aaKnown RBP11.8□□□□□ -0.52
USP43-205ENST00000574408 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 MTMR8Q96EF0 704 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 PSTPIP2Q9H939 334 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 HDAC9Q9UKV0 1011 aa11.8□□□□□ -0.52
USP43-205ENST00000574408 F5H6K3 240 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 SLC37A4O43826 429 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 KLRC3Q07444 240 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 IKQ13123 557 aaPredicted RBP11.79□□□□□ -0.52
USP43-205ENST00000574408 ORC2Q13416 577 aaPredicted RBP11.79□□□□□ -0.52
USP43-205ENST00000574408 CDC37Q16543 378 aaPredicted RBP11.79□□□□□ -0.52
USP43-205ENST00000574408 USP27XA6NNY8 438 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 NRDCO43847 1150 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 RRP1BQ14684 758 aaKnown RBP11.79□□□□□ -0.52
USP43-205ENST00000574408 LRRC15Q8TF66 581 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 TRMT1Q9NXH9 659 aaKnown RBP11.79□□□□□ -0.52
USP43-205ENST00000574408 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.79□□□□□ -0.52
USP43-205ENST00000574408 MAPK8IP1Q9UQF2 711 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 GDAQ9Y2T3 454 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 V9GYY5 206 aaPredicted RBP11.79□□□□□ -0.52
USP43-205ENST00000574408 NDUFB10O96000 172 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 VIL1P09327 827 aaKnown RBP11.79□□□□□ -0.52
USP43-205ENST00000574408 GOLGA8FQ08AF8 430 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 GOLGA8DPQ0D2H9 430 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.79□□□□□ -0.52
USP43-205ENST00000574408 VEZTQ9HBM0 779 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 PCDHA1Q9Y5I3 950 aa11.79□□□□□ -0.52
USP43-205ENST00000574408 EDIL3O43854 480 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 SNAP25P60880 206 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 DHX8Q14562 1220 aaKnown RBP11.78□□□□□ -0.52
USP43-205ENST00000574408 ZNF658Q5TYW1 1059 aaPredicted RBP11.78□□□□□ -0.52
USP43-205ENST00000574408 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 GMLQ99445 158 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 ZNF70Q9UC06 446 aaPredicted RBP11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L15C9J2P7 530 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L13C9JLJ4 530 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L11C9JVI0 530 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L18D6R9N7 530 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L22D6RA61 530 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L17D6RBQ6 530 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L19D6RCP7 530 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L20D6RJB6 530 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 PDE4CQ08493 712 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L24Q0WX57 530 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 PAK1Q13153 545 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 USP17L6PQ6QN14 398 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 PRIMPOLQ96LW4 560 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 MTMR9Q96QG7 549 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 KBTBD4Q9NVX7 518 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 LRWD1Q9UFC0 647 aa11.78□□□□□ -0.52
USP43-205ENST00000574408 COL4A5P29400 1685 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms