RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 HAUS7Q99871 368 aa14.24□□□□□ -0.13
CTNS-208ENST00000574218 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
CTNS-208ENST00000574218 TRPV6Q9H1D0 765 aa14.24□□□□□ -0.13
CTNS-208ENST00000574218 COG5Q9UP83 839 aa14.24□□□□□ -0.13
CTNS-208ENST00000574218 TANC1Q9C0D5 1861 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.23□□□□□ -0.13
CTNS-208ENST00000574218 CTAGE5O15320 804 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 B4GALT4O60513 344 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 SUPT20HL2P0C7V6 817 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 BMP3P12645 472 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 MYOGP15173 224 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 CNTN2Q02246 1040 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 SBK1Q52WX2 424 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 TMEM31Q5JXX7 168 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 SCLYQ96I15 445 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 KATNBL1Q9H079 304 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 RNF146Q9NTX7 359 aa14.23□□□□□ -0.13
CTNS-208ENST00000574218 CHD7Q9P2D1 2997 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 TRANK1O15050 2925 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 KIF28PB7ZC32 967 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 TTLL1O95922 423 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 MS4A1P11836 297 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 TDO2P48775 406 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 STAT2P52630 851 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 TKFCQ3LXA3 575 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 SLFN13Q68D06 897 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 IQSEC1Q6DN90 963 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 RPAP2Q8IXW5 612 aaPredicted RBP14.22□□□□□ -0.13
CTNS-208ENST00000574218 LRRC47Q8N1G4 583 aaKnown RBP14.22□□□□□ -0.13
CTNS-208ENST00000574218 FAM133AQ8N9E0 248 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 CHURC1Q8WUH1 139 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 SLC9A7Q96T83 725 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 PUS7LQ9H0K6 701 aaKnown RBP14.22□□□□□ -0.13
CTNS-208ENST00000574218 WNT8AQ9H1J5 351 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 POLR3EQ9NVU0 708 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 SYNPO2Q9UMS6 1093 aa14.22□□□□□ -0.13
CTNS-208ENST00000574218 GNEQ9Y223 722 aaKnown RBP14.22□□□□□ -0.13
CTNS-208ENST00000574218 ARIH1Q9Y4X5 557 aaPredicted RBP14.22□□□□□ -0.13
CTNS-208ENST00000574218 ASTN1O14525 1302 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 COL4A4P53420 1690 aaPredicted RBP14.21□□□□□ -0.13
CTNS-208ENST00000574218 CA3P07451 260 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 ALAS1P13196 640 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 PSMC6P62333 389 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 GIMAP6Q6P9H5 292 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 DEFB128Q7Z7B8 93 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 FAM160B2Q86V87 743 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 CEP95Q96GE4 821 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 LRFN3Q9BTN0 628 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 CERS4Q9HA82 394 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 A1CFQ9NQ94 594 aaKnown RBP14.21□□□□□ -0.13
CTNS-208ENST00000574218 GPHNQ9NQX3 736 aaPredicted RBP14.21□□□□□ -0.13
CTNS-208ENST00000574218 Q9Y3F1 56 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 MTCH2Q9Y6C9 303 aa14.21□□□□□ -0.13
CTNS-208ENST00000574218 TRIP12Q14669 1992 aaPredicted RBP14.21□□□□□ -0.13
CTNS-208ENST00000574218 REV3LO60673 3130 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 LCTP09848 1927 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 SOWAHBA6NEL2 793 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 TMEM232C9JQI7 657 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 RFXAPO00287 272 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 APPP05067 770 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 TSPY3P0CV98 308 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 TSPY8P0CW00 308 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 SMPD1P17405 629 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 RFC2P35250 354 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 BRDTQ58F21 947 aaPredicted RBP14.2□□□□□ -0.14
CTNS-208ENST00000574218 FAM47CQ5HY64 1035 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 KIAA1211Q6ZU35 1233 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 EEPD1Q7L9B9 569 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 FBXO16Q8IX29 292 aaPredicted RBP14.2□□□□□ -0.14
CTNS-208ENST00000574218 RETREG2Q8NC44 543 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 PANK1Q8TE04 598 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 ARNTL2Q8WYA1 636 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 HLA-CQ95604 372 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 MKL1Q969V6 931 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 TRERF1Q96PN7 1200 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 ALDH8A1Q9H2A2 487 aaPredicted RBP14.2□□□□□ -0.14
CTNS-208ENST00000574218 VTA1Q9NP79 307 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 MTMR4Q9NYA4 1195 aa14.2□□□□□ -0.14
CTNS-208ENST00000574218 GRIN2DO15399 1336 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 TNKSO95271 1327 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 PRDM1O75626 825 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 CHGBP05060 677 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 SLC3A2P08195 630 aaKnown RBP14.19□□□□□ -0.14
CTNS-208ENST00000574218 GNAT2P19087 354 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 POU3F3P20264 500 aaPredicted RBP14.19□□□□□ -0.14
CTNS-208ENST00000574218 CPT1AP50416 773 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 TTLL4Q14679 1199 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 PPP4R3BQ5MIZ7 849 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 PHOSPHO2Q8TCD6 241 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 AGBL1Q96MI9 1066 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 STRBPQ96SI9 672 aaKnown RBP14.19□□□□□ -0.14
CTNS-208ENST00000574218 FTOQ9C0B1 505 aaKnown RBP eCLIP14.19□□□□□ -0.14
CTNS-208ENST00000574218 EPHX3Q9H6B9 360 aa14.19□□□□□ -0.14
CTNS-208ENST00000574218 RAD50Q92878 1312 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 IGKV6D-41A0A0C4DH26 115 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 GSG1L2A8MUP6 293 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 MYL3P08590 195 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 CYP2C9P11712 490 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms