RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 TINF2Q9BSI4 451 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 RNF41Q9H4P4 317 aaPredicted RBP11.76□□□□□ -0.53
RPA1-206ENST00000573994 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 RNF146Q9NTX7 359 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 PRR12Q9ULL5 1215 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 ZNF536O15090 1300 aa11.76□□□□□ -0.53
RPA1-206ENST00000573994 B4E1Z4 1266 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 KDM4AO75164 1064 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 FDX1P10109 184 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 ALAS1P13196 640 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 SYN1P17600 705 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 OAZ1P54368 228 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 LRRC26Q2I0M4 334 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 SKAP1Q86WV1 359 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 CHST13Q8NET6 341 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 FGD4Q96M96 766 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 SENP6Q9GZR1 1112 aaPredicted RBP11.75□□□□□ -0.53
RPA1-206ENST00000573994 ACAD9Q9H845 621 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 TCP11L1Q9NUJ3 509 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
RPA1-206ENST00000573994 ZHX1Q9UKY1 873 aaPredicted RBP11.75□□□□□ -0.53
RPA1-206ENST00000573994 CNPY2Q9Y2B0 182 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 LAMA3Q16787 3333 aa11.75□□□□□ -0.53
RPA1-206ENST00000573994 FRMPD3Q5JV73 1810 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 ALPK3Q96L96 1907 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 DNAJC25-GNG10A0A024R161 153 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 DNM1LO00429 736 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 ZNF865P0CJ78 1059 aaPredicted RBP11.74□□□□□ -0.53
RPA1-206ENST00000573994 PDHBP11177 359 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 PBX2P40425 430 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
RPA1-206ENST00000573994 SYDE2Q5VT97 1194 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 A1CFQ9NQ94 594 aaKnown RBP11.74□□□□□ -0.53
RPA1-206ENST00000573994 XPNPEP3Q9NQH7 507 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 FBXO40Q9UH90 709 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 CCPG1Q9ULG6 757 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 DIS3Q9Y2L1 958 aaKnown RBP11.74□□□□□ -0.53
RPA1-206ENST00000573994 DDX49Q9Y6V7 483 aaKnown RBP11.74□□□□□ -0.53
RPA1-206ENST00000573994 RAD50Q92878 1312 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 LAMA4Q16363 1823 aa11.74□□□□□ -0.53
RPA1-206ENST00000573994 DNAH12Q6ZR08 3092 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 KBTBD13C9JR72 458 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 PLA2G6O60733 806 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 PGK1P00558 417 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 GOLGA8HP0CJ92 632 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 RARBP10826 455 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 CHMLP26374 656 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 LRRC41Q15345 812 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 MUM1L1Q5H9M0 696 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
RPA1-206ENST00000573994 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.53
RPA1-206ENST00000573994 TRERF1Q96PN7 1200 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 SYNGAP1Q96PV0 1343 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
RPA1-206ENST00000573994 CPVLQ9H3G5 476 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 NRBP1Q9UHY1 535 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 CTNNA3Q9UI47 895 aa11.73□□□□□ -0.53
RPA1-206ENST00000573994 TNKSO95271 1327 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 SNAI1O95863 264 aaPredicted RBP11.72□□□□□ -0.53
RPA1-206ENST00000573994 ICAM1P05362 532 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 AKR1A1P14550 325 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 FXR1P51114 621 aaKnown RBP eCLIP11.72□□□□□ -0.53
RPA1-206ENST00000573994 PTH1RQ03431 593 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 ZNF543Q08ER8 600 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 NSMFQ6X4W1 530 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 IQCA1Q86XH1 822 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 ENAHQ8N8S7 591 aaPredicted RBP11.72□□□□□ -0.53
RPA1-206ENST00000573994 ARRDC4Q8NCT1 418 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 FERMT2Q96AC1 680 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 PRO3102Q9H379 93 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
RPA1-206ENST00000573994 TAF6LQ9Y6J9 622 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 SZT2Q5T011 3432 aa11.72□□□□□ -0.53
RPA1-206ENST00000573994 NFIBO00712 420 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 ADCYAP1R1P41586 468 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 MAGEA10P43363 369 aaPredicted RBP11.71□□□□□ -0.53
RPA1-206ENST00000573994 RTP1P59025 263 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 TKFCQ3LXA3 575 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 MAMDC4Q6UXC1 1216 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 BTNL9Q6UXG8 535 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 MSL3Q8N5Y2 521 aaKnown RBP11.71□□□□□ -0.53
RPA1-206ENST00000573994 FAM133AQ8N9E0 248 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 PNMA1Q8ND90 353 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 PTCD2Q8WV60 388 aaKnown RBP11.71□□□□□ -0.53
RPA1-206ENST00000573994 RUFY2Q8WXA3 655 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 TTC14Q96N46 770 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 PURBQ96QR8 312 aaKnown RBP11.71□□□□□ -0.53
RPA1-206ENST00000573994 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.53
RPA1-206ENST00000573994 UBAC1Q9BSL1 405 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 CYP39A1Q9NYL5 469 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 ATP11BQ9Y2G3 1177 aa11.71□□□□□ -0.53
RPA1-206ENST00000573994 ASTN1O14525 1302 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 SYNRGQ9UMZ2 1314 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms