RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ACLYP53396 1101 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 SNX17Q15036 470 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 KCNA10Q16322 511 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 BTNL9Q6UXG8 535 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 PCSK9Q8NBP7 692 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 VTI1AQ96AJ9 217 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 UBAC1Q9BSL1 405 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 KRT23Q9C075 422 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 CNNM2Q9H8M5 875 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 PDLIM7Q9NR12 457 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 RAD50Q92878 1312 aa11.32□□□□□ -0.6
NPLOC4-212ENST00000573328 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 MYADML2A6NDP7 307 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 NFIBO00712 420 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 DHX16O60231 1041 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 CLTBP09497 229 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 GOLGA8HP0CJ92 632 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 NT5C2P49902 561 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 TNFAIP2Q03169 654 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 TLE2Q04725 743 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 USH1GQ495M9 461 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 EEPD1Q7L9B9 569 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 DGKHQ86XP1 1220 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 ZSCAN10Q96SZ4 725 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 TSEN34Q9BSV6 310 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 ADD3Q9UEY8 706 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 TNKSO95271 1327 aa11.31□□□□□ -0.6
NPLOC4-212ENST00000573328 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 DCDC2CA8MYV0 355 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 ADCY6O43306 1168 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 ASGR1P07306 291 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 CALML3P27482 149 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 TRDNQ13061 729 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 LRIT3Q3SXY7 679 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 C1orf53Q5VUE5 145 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 KLHDC9Q8NEP7 349 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 BADQ92934 168 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 MPHOSPH6Q99547 160 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 AP5M1Q9H0R1 490 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 IL25Q9H293 177 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 CPVLQ9H3G5 476 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 PNMA2Q9UL42 364 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 DDX49Q9Y6V7 483 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 MYH7BA7E2Y1 1941 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 MROH7Q68CQ1 1323 aa11.3□□□□□ -0.6
NPLOC4-212ENST00000573328 BAZ2BQ9UIF8 2168 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 A0A0U1RQG5 324 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 RAG1P15918 1043 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 ALDH5A1P51649 535 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 GJA9P57773 515 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 BEX3Q00994 111 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 ASPRV1Q53RT3 343 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 IFIT1BQ5T764 474 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 RNF207Q6ZRF8 634 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 KIAA1211Q6ZU35 1233 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 ENAHQ8N8S7 591 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 KATNBL1Q9H079 304 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 UPF3AQ9H1J1 476 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 ASTN1O14525 1302 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
NPLOC4-212ENST00000573328 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 ZEB2O60315 1214 aa11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 PARP1P09874 1014 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 PDE4DQ08499 809 aa11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 RALYLQ86SE5 291 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 DEFB123Q8N688 67 aa11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 PDGFCQ9NRA1 345 aa11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 ELP1O95163 1332 aa11.28□□□□□ -0.6
NPLOC4-212ENST00000573328 ERICH2A1L162 156 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 B4DLN1 442 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 TLR3O15455 904 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 DYNC1LI2O43237 492 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 SMPD1P17405 629 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 CHMLP26374 656 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 MRPL12P52815 198 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 RPS6P62753 249 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms