RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 EHBP1Q8NDI1 1231 aa19.52■□□□□ 0.71
SCARF1-205ENST00000571272 MCM3P25205 808 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 AARSP49588 968 aaKnown RBP eCLIP19.51■□□□□ 0.71
SCARF1-205ENST00000571272 PDE4DQ08499 809 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 STK4Q13043 487 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 CELF1Q92879 486 aaKnown RBP19.51■□□□□ 0.71
SCARF1-205ENST00000571272 HPS3Q969F9 1004 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 CRACR2AQ9BSW2 395 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 FCER1AP12319 257 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 PLCG1P19174 1290 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 ITPK1Q13572 414 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 NOC4LQ9BVI4 516 aaKnown RBP19.51■□□□□ 0.71
SCARF1-205ENST00000571272 SELENOOQ9BVL4 669 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 IL17RBQ9NRM6 502 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 LRWD1Q9UFC0 647 aa19.51■□□□□ 0.71
SCARF1-205ENST00000571272 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
SCARF1-205ENST00000571272 ZBED6P86452 979 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 P2RX5Q93086 422 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 DYNLL2Q96FJ2 89 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 EIF3CLB5ME19 914 aaKnown RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 KIF5AQ12840 1032 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 CCNI2Q6ZMN8 369 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 BICDL1Q6ZP65 573 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 SMARCC1Q92922 1105 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 EIF3CQ99613 913 aaKnown RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 BSDC1Q9NW68 430 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 TARSL2A2RTX5 802 aaKnown RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 ZNF263O14978 683 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 ASIC1P78348 528 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 EZH2Q15910 746 aaKnown RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 CCDC96Q2M329 555 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 SLC35G1Q2M3R5 365 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 SECISBP2LQ93073 1101 aaKnown RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 DHTKD1Q96HY7 919 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 RPGRIP1Q96KN7 1286 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 PSMB7Q99436 277 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 CPVLQ9H3G5 476 aa19.5■□□□□ 0.71
SCARF1-205ENST00000571272 MKRN1Q9UHC7 482 aaKnown RBP19.5■□□□□ 0.71
SCARF1-205ENST00000571272 USP17L3A6NCW0 530 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 USP17L4A6NCW7 530 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 ADAMTS2O95450 1211 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 USP17L1Q7RTZ2 530 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 CCDC42Q96M95 316 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 NUP58Q9BVL2 599 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 CCSER1Q9C0I3 900 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 ATP8A2Q9NTI2 1148 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 LOC102724428A0A0B4J2F2 783 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 M0R2N6 131 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 CCNE1P24864 410 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 MATR3P43243 847 aaKnown RBP eCLIP19.49■□□□□ 0.71
SCARF1-205ENST00000571272 SIK1P57059 783 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 TXNRD1Q16881 649 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 CABP7Q86V35 215 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 HDAC7Q8WUI4 952 aa19.49■□□□□ 0.71
SCARF1-205ENST00000571272 ARPP21Q9UBL0 812 aaPredicted RBP19.49■□□□□ 0.71
SCARF1-205ENST00000571272 ABCA3Q99758 1704 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 NUTM2BA6NNL0 878 aaPredicted RBP19.48■□□□□ 0.71
SCARF1-205ENST00000571272 NUTM2EB1AL46 878 aaPredicted RBP19.48■□□□□ 0.71
SCARF1-205ENST00000571272 CYTH3O43739 400 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 GOLGA8HP0CJ92 632 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 ERCC3P19447 782 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 MIIPQ5JXC2 388 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 CCDC170Q8IYT3 715 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 AGPSO00116 658 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 SPA17Q15506 151 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 ZNF662Q6ZS27 426 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 TRIM9Q9C026 710 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 MLXIPQ9HAP2 919 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 SH3GLB2Q9NR46 395 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 CAPN6Q9Y6Q1 641 aa19.48■□□□□ 0.71
SCARF1-205ENST00000571272 VAV2P52735 878 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 LETM2Q2VYF4 491 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 FBXO33Q7Z6M2 555 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 NOC3LQ8WTT2 800 aaKnown RBP19.47■□□□□ 0.71
SCARF1-205ENST00000571272 TCP11L1Q9NUJ3 509 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 MAD2L2Q9UI95 211 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 DLEC1Q9Y238 1755 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 XIRP1Q702N8 1843 aaKnown RBP19.47■□□□□ 0.71
SCARF1-205ENST00000571272 C2CD5Q86YS7 1000 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 RETREG2Q8NC44 543 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 FAM207AQ9NSI2 230 aaPredicted RBP19.47■□□□□ 0.71
SCARF1-205ENST00000571272 SMARCAL1Q9NZC9 954 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 A0A1B0GUL6 1792 aa19.47■□□□□ 0.71
SCARF1-205ENST00000571272 ANO9A1A5B4 782 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 MYL1P05976 194 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 CXCR5P32302 372 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 STX8Q9UNK0 236 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 BICDL2A1A5D9 508 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 CCNT1O60563 726 aaKnown RBP19.46■□□□□ 0.71
SCARF1-205ENST00000571272 SLC7A5Q01650 507 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 CREG2Q8IUH2 290 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 PURBQ96QR8 312 aaKnown RBP19.46■□□□□ 0.71
SCARF1-205ENST00000571272 LRRC1Q9BTT6 524 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 MKNK2Q9HBH9 465 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 SLC39A2Q9NP94 309 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 DMGDHQ9UI17 866 aaKnown RBP19.46■□□□□ 0.71
SCARF1-205ENST00000571272 MYH10P35580 1976 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 EPHB6O15197 1021 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 MOCS3O95396 460 aa19.46■□□□□ 0.71
SCARF1-205ENST00000571272 FKBP15Q5T1M5 1219 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms