RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
CIITA-205ENST00000571186 AP5M1Q9H0R1 490 aa17■□□□□ 0.31
CIITA-205ENST00000571186 RNF146Q9NTX7 359 aa17■□□□□ 0.31
CIITA-205ENST00000571186 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
CIITA-205ENST00000571186 TCF20Q9UGU0 1960 aaKnown RBP16.99■□□□□ 0.31
CIITA-205ENST00000571186 SOWAHBA6NEL2 793 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 ASB14A6NK59 587 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 TNFRSF10AO00220 468 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 DYNC1LI2O43237 492 aaPredicted RBP16.99■□□□□ 0.31
CIITA-205ENST00000571186 SLC3A2P08195 630 aaKnown RBP16.99■□□□□ 0.31
CIITA-205ENST00000571186 ALAS1P13196 640 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 MCCP23508 829 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 ITGA7Q13683 1181 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 AAMPQ13685 434 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 CCDC85BQ15834 202 aaPredicted RBP16.99■□□□□ 0.31
CIITA-205ENST00000571186 FAM160B2Q86V87 743 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 STAG1Q8WVM7 1258 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 HERVK_113Q902F9 699 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 NACAP1Q9BZK3 213 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 MTIF3Q9H2K0 278 aaKnown RBP16.99■□□□□ 0.31
CIITA-205ENST00000571186 HIPK3Q9H422 1215 aa16.99■□□□□ 0.31
CIITA-205ENST00000571186 A1CFQ9NQ94 594 aaKnown RBP16.99■□□□□ 0.31
CIITA-205ENST00000571186 ASTN1O14525 1302 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 REV3LO60673 3130 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 ZEB2O60315 1214 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 CABYRO75952 493 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 SLC1A4P43007 532 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 NKX3-2P78367 333 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 RAB30Q15771 203 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 FSCN1Q16658 493 aaKnown RBP16.98■□□□□ 0.31
CIITA-205ENST00000571186 LRRFIP1Q32MZ4 808 aaKnown RBP16.98■□□□□ 0.31
CIITA-205ENST00000571186 AKNAD1Q5T1N1 836 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 TLK2Q86UE8 772 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 NKX2-4Q9H2Z4 354 aa16.98■□□□□ 0.31
CIITA-205ENST00000571186 CXXC1Q9P0U4 656 aaPredicted RBP16.98■□□□□ 0.31
CIITA-205ENST00000571186 GNEQ9Y223 722 aaKnown RBP16.98■□□□□ 0.31
CIITA-205ENST00000571186 ZNF536O15090 1300 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 PTGS1P23219 599 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 CCL23P55773 120 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 SNAP25P60880 206 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 TKFCQ3LXA3 575 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 EEPD1Q7L9B9 569 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 OTOP2Q7RTS6 562 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 SLC43A3Q8NBI5 491 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 ATXN2LQ8WWM7 1075 aaKnown RBP16.97■□□□□ 0.31
CIITA-205ENST00000571186 GMCL1Q96IK5 515 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 SEC62Q99442 399 aaKnown RBP16.97■□□□□ 0.31
CIITA-205ENST00000571186 NAPBQ9H115 298 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 TRPV6Q9H1D0 765 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 RWDD1Q9H446 243 aaPredicted RBP16.97■□□□□ 0.31
CIITA-205ENST00000571186 SLC28A3Q9HAS3 691 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 PDGFCQ9NRA1 345 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 DDX49Q9Y6V7 483 aaKnown RBP16.97■□□□□ 0.31
CIITA-205ENST00000571186 BDP1A6H8Y1 2624 aa16.97■□□□□ 0.31
CIITA-205ENST00000571186 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.31
CIITA-205ENST00000571186 SMPD1P17405 629 aa16.96■□□□□ 0.31
CIITA-205ENST00000571186 ADGRE1Q14246 886 aa16.96■□□□□ 0.31
CIITA-205ENST00000571186 IQSEC1Q6DN90 963 aa16.96■□□□□ 0.31
CIITA-205ENST00000571186 KCTD1Q719H9 257 aa16.96■□□□□ 0.31
CIITA-205ENST00000571186 ASB2Q96Q27 587 aa16.96■□□□□ 0.31
CIITA-205ENST00000571186 THEGQ9P2T0 379 aa16.96■□□□□ 0.31
CIITA-205ENST00000571186 MTMR7Q9Y216 660 aa16.96■□□□□ 0.31
CIITA-205ENST00000571186 GRIN2DO15399 1336 aa16.96■□□□□ 0.3
CIITA-205ENST00000571186 SALL3Q9BXA9 1300 aa16.96■□□□□ 0.3
CIITA-205ENST00000571186 PLIN4Q96Q06 1357 aa16.95■□□□□ 0.3
CIITA-205ENST00000571186 PPARAQ07869 468 aa16.95■□□□□ 0.3
CIITA-205ENST00000571186 MUM1L1Q5H9M0 696 aa16.95■□□□□ 0.3
CIITA-205ENST00000571186 RCSD1Q6JBY9 416 aa16.95■□□□□ 0.3
CIITA-205ENST00000571186 RPUSD2Q8IZ73 545 aaKnown RBP16.95■□□□□ 0.3
CIITA-205ENST00000571186 PI4K2BQ8TCG2 481 aa16.95■□□□□ 0.3
CIITA-205ENST00000571186 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
CIITA-205ENST00000571186 STX8Q9UNK0 236 aa16.95■□□□□ 0.3
CIITA-205ENST00000571186 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
CIITA-205ENST00000571186 LCTP09848 1927 aa16.95■□□□□ 0.3
CIITA-205ENST00000571186 SCN5AQ14524 2016 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 LRRC37A2A6NM11 1700 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 TSPY2A6NKD2 308 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 B4GALT4O60513 344 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 PLA2G6O60733 806 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 MX1P20591 662 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 RABGGTBP53611 331 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 PSMC6P62333 389 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 MRPS5P82675 430 aaKnown RBP16.94■□□□□ 0.3
CIITA-205ENST00000571186 PPP4R3BQ5MIZ7 849 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 TMEM63BQ5T3F8 832 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 TAPT1Q6NXT6 567 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 NSMFQ6X4W1 530 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 KIAA1211Q6ZU35 1233 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 FBXO16Q8IX29 292 aaPredicted RBP16.94■□□□□ 0.3
CIITA-205ENST00000571186 SMC5Q8IY18 1101 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 NOC4LQ9BVI4 516 aaKnown RBP16.94■□□□□ 0.3
CIITA-205ENST00000571186 SEZ6LQ9BYH1 1024 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 INCENPQ9NQS7 918 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 CYP39A1Q9NYL5 469 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
CIITA-205ENST00000571186 PRR12Q9ULL5 1215 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 SLC4A7Q9Y6M7 1214 aa16.94■□□□□ 0.3
CIITA-205ENST00000571186 TRANK1O15050 2925 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms