RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 MUC3AQ02505 3323 aa22.56■■□□□ 1.2
SCARF1-204ENST00000570902 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.56■■□□□ 1.2
SCARF1-204ENST00000570902 FGBP02675 491 aa22.56■■□□□ 1.2
SCARF1-204ENST00000570902 SLC1A4P43007 532 aa22.56■■□□□ 1.2
SCARF1-204ENST00000570902 FSCN1Q16658 493 aaKnown RBP22.56■■□□□ 1.2
SCARF1-204ENST00000570902 CXCL17Q6UXB2 119 aa22.56■■□□□ 1.2
SCARF1-204ENST00000570902 PPM1EQ8WY54 764 aa22.56■■□□□ 1.2
SCARF1-204ENST00000570902 THEGQ9P2T0 379 aa22.56■■□□□ 1.2
SCARF1-204ENST00000570902 SOWAHBA6NEL2 793 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 PLA2G6O60733 806 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 TFAP4Q01664 338 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 ITGA7Q13683 1181 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 AGBL1Q96MI9 1066 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 TRERF1Q96PN7 1200 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 Q9Y3F1 56 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 ASTN1O14525 1302 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 ZNF536O15090 1300 aa22.55■■□□□ 1.2
SCARF1-204ENST00000570902 TSHZ3Q63HK5 1081 aa22.54■■□□□ 1.2
SCARF1-204ENST00000570902 IQSEC1Q6DN90 963 aa22.54■■□□□ 1.2
SCARF1-204ENST00000570902 NAPBQ9H115 298 aa22.54■■□□□ 1.2
SCARF1-204ENST00000570902 SLC28A3Q9HAS3 691 aa22.54■■□□□ 1.2
SCARF1-204ENST00000570902 ALAS1P13196 640 aa22.53■■□□□ 1.2
SCARF1-204ENST00000570902 PPARAQ07869 468 aa22.53■■□□□ 1.2
SCARF1-204ENST00000570902 ASB2Q96Q27 587 aa22.53■■□□□ 1.2
SCARF1-204ENST00000570902 DCTPP1Q9H773 170 aa22.53■■□□□ 1.2
SCARF1-204ENST00000570902 CXXC1Q9P0U4 656 aaPredicted RBP22.53■■□□□ 1.2
SCARF1-204ENST00000570902 DYNC1LI2O43237 492 aaPredicted RBP22.52■■□□□ 1.2
SCARF1-204ENST00000570902 SMPD1P17405 629 aa22.52■■□□□ 1.2
SCARF1-204ENST00000570902 IGFBP4P22692 258 aa22.52■■□□□ 1.2
SCARF1-204ENST00000570902 MCCP23508 829 aa22.52■■□□□ 1.2
SCARF1-204ENST00000570902 RPUSD2Q8IZ73 545 aaKnown RBP22.52■■□□□ 1.2
SCARF1-204ENST00000570902 NKX2-4Q9H2Z4 354 aa22.52■■□□□ 1.2
SCARF1-204ENST00000570902 MRPS5P82675 430 aaKnown RBP22.51■■□□□ 1.19
SCARF1-204ENST00000570902 ADGRE1Q14246 886 aa22.51■■□□□ 1.19
SCARF1-204ENST00000570902 RCSD1Q6JBY9 416 aa22.51■■□□□ 1.19
SCARF1-204ENST00000570902 OTOP2Q7RTS6 562 aa22.51■■□□□ 1.19
SCARF1-204ENST00000570902 NOC4LQ9BVI4 516 aaKnown RBP22.51■■□□□ 1.19
SCARF1-204ENST00000570902 CYP39A1Q9NYL5 469 aa22.51■■□□□ 1.19
SCARF1-204ENST00000570902 STX8Q9UNK0 236 aa22.51■■□□□ 1.19
SCARF1-204ENST00000570902 TTC41PQ6P2S7 1318 aa22.51■■□□□ 1.19
SCARF1-204ENST00000570902 ERC2O15083 957 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 CCL23P55773 120 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 TAPT1Q6NXT6 567 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 KCTD1Q719H9 257 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 IL27Q8NEV9 243 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 TRPV6Q9H1D0 765 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 VTA1Q9NP79 307 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 LRRC37A2A6NM11 1700 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 GRIN2DO15399 1336 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 UMODL1Q5DID0 1318 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 CHD9Q3L8U1 2897 aa22.5■■□□□ 1.19
SCARF1-204ENST00000570902 TSPY2A6NKD2 308 aa22.49■■□□□ 1.19
SCARF1-204ENST00000570902 B4GALT4O60513 344 aa22.49■■□□□ 1.19
SCARF1-204ENST00000570902 CCDC85BQ15834 202 aaPredicted RBP22.49■■□□□ 1.19
SCARF1-204ENST00000570902 C20orf194Q5TEA3 1177 aa22.49■■□□□ 1.19
SCARF1-204ENST00000570902 EEPD1Q7L9B9 569 aa22.49■■□□□ 1.19
SCARF1-204ENST00000570902 FBXO16Q8IX29 292 aaPredicted RBP22.49■■□□□ 1.19
SCARF1-204ENST00000570902 CHMP4CQ96CF2 233 aa22.49■■□□□ 1.19
SCARF1-204ENST00000570902 SEC62Q99442 399 aaKnown RBP22.49■■□□□ 1.19
SCARF1-204ENST00000570902 TSPYL2Q9H2G4 693 aaPredicted RBP22.49■■□□□ 1.19
SCARF1-204ENST00000570902 PDGFCQ9NRA1 345 aa22.49■■□□□ 1.19
SCARF1-204ENST00000570902 CCPG1Q9ULG6 757 aa22.49■■□□□ 1.19
SCARF1-204ENST00000570902 PRR12Q9ULL5 1215 aa22.49■■□□□ 1.19
SCARF1-204ENST00000570902 YBX2Q9Y2T7 364 aaKnown RBP22.49■■□□□ 1.19
SCARF1-204ENST00000570902 SLC4A7Q9Y6M7 1214 aa22.49■■□□□ 1.19
SCARF1-204ENST00000570902 MUM1L1Q5H9M0 696 aa22.48■■□□□ 1.19
SCARF1-204ENST00000570902 KIAA1211Q6ZU35 1233 aa22.48■■□□□ 1.19
SCARF1-204ENST00000570902 ADAMTS19Q8TE59 1207 aa22.48■■□□□ 1.19
SCARF1-204ENST00000570902 MORC4Q8TE76 937 aa22.48■■□□□ 1.19
SCARF1-204ENST00000570902 FSD1Q9BTV5 496 aa22.48■■□□□ 1.19
SCARF1-204ENST00000570902 WNT8AQ9H1J5 351 aa22.48■■□□□ 1.19
SCARF1-204ENST00000570902 ADD3Q9UEY8 706 aaKnown RBP22.48■■□□□ 1.19
SCARF1-204ENST00000570902 PFKMP08237 780 aa22.47■■□□□ 1.19
SCARF1-204ENST00000570902 SUPT20HL2P0C7V6 817 aa22.47■■□□□ 1.19
SCARF1-204ENST00000570902 COL9A1P20849 921 aa22.47■■□□□ 1.19
SCARF1-204ENST00000570902 PSMC6P62333 389 aa22.47■■□□□ 1.19
SCARF1-204ENST00000570902 ZMYM1Q5SVZ6 1142 aa22.47■■□□□ 1.19
SCARF1-204ENST00000570902 PPP2R2DQ66LE6 453 aa22.47■■□□□ 1.19
SCARF1-204ENST00000570902 NSMFQ6X4W1 530 aa22.47■■□□□ 1.19
SCARF1-204ENST00000570902 ALDH8A1Q9H2A2 487 aaPredicted RBP22.47■■□□□ 1.19
SCARF1-204ENST00000570902 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.47■■□□□ 1.19
SCARF1-204ENST00000570902 PCDHA11Q9Y5I1 949 aa22.47■■□□□ 1.19
SCARF1-204ENST00000570902 LOC102724159A0A0B4J2E5 919 aa22.46■■□□□ 1.19
SCARF1-204ENST00000570902 ICAM1P05362 532 aa22.46■■□□□ 1.19
SCARF1-204ENST00000570902 SNAP25P60880 206 aa22.46■■□□□ 1.19
SCARF1-204ENST00000570902 PWP2Q15269 919 aaKnown RBP22.46■■□□□ 1.19
SCARF1-204ENST00000570902 DUSP28Q4G0W2 176 aa22.46■■□□□ 1.19
SCARF1-204ENST00000570902 IL17RBQ9NRM6 502 aa22.46■■□□□ 1.19
SCARF1-204ENST00000570902 POLR3EQ9NVU0 708 aa22.46■■□□□ 1.19
SCARF1-204ENST00000570902 DDX49Q9Y6V7 483 aaKnown RBP22.46■■□□□ 1.19
SCARF1-204ENST00000570902 ZBBXA8MT70 800 aa22.45■■□□□ 1.18
SCARF1-204ENST00000570902 PTGS1P23219 599 aa22.45■■□□□ 1.18
SCARF1-204ENST00000570902 RABGGTBP53611 331 aa22.45■■□□□ 1.18
SCARF1-204ENST00000570902 DCAF4Q8WV16 495 aa22.45■■□□□ 1.18
SCARF1-204ENST00000570902 UHRF1Q96T88 793 aaPredicted RBP22.45■■□□□ 1.18
SCARF1-204ENST00000570902 GBF1Q92538 1859 aa22.45■■□□□ 1.18
SCARF1-204ENST00000570902 ATP2A2P16615 1042 aaKnown RBP22.44■■□□□ 1.18
SCARF1-204ENST00000570902 CPT1AP50416 773 aa22.44■■□□□ 1.18
SCARF1-204ENST00000570902 CCDC96Q2M329 555 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms